Gene Swoo_2337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2337 
Symbol 
ID6116608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2870866 
End bp2871360 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content44% 
IMG OID641633843 
ProductMarR family transcriptional regulator 
Protein accessionYP_001760711 
Protein GI170726685 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.585939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAAG CTAAACTGGC TCAAACTTCG ATTTCATTAA ACCAGTTTTT ACCCTATAGA 
CTGGTCAATT TAGCTCAAAA GGTCAGTGTA AACTTTGCCG AGGTGTACCA GTCAGAGTTT
AACCTCACCA CACCTGAATG GAGAATATTA GTCCACTTAG CCGAGCAGAC ACTTTGTGAT
AAAAGTGATG GGTCTGTTAG ACAGCAATCA ACAGGTATTA GCGCCAAAGA GTTAACAGAA
TTGGCATCGA TGGATAAATC CACCGTCTCC CGCGCCGTCA AGCTTATGCT CGACAAGGGC
TACATCACTA AGCAAGTCCA TATAGCCGAC AAGCGCGCTT TTACACTCAC CCTTACCACA
GCAGGCTTTG CTCTATATCA AACCATCGCC CCCAAAGCAC TTGCATGGGA GGAGAGTCTT
CTCAAGGCGT TAGATAAACA GGAATACCAA GCACTAATGC AGATTTTAGA TAAACTCGAT
AGCAAACTGA GTTGA
 
Protein sequence
MSQAKLAQTS ISLNQFLPYR LVNLAQKVSV NFAEVYQSEF NLTTPEWRIL VHLAEQTLCD 
KSDGSVRQQS TGISAKELTE LASMDKSTVS RAVKLMLDKG YITKQVHIAD KRAFTLTLTT
AGFALYQTIA PKALAWEESL LKALDKQEYQ ALMQILDKLD SKLS