Gene Swoo_2214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2214 
Symbol 
ID6116484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2718853 
End bp2719596 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content41% 
IMG OID641633722 
Productcytochrome B561 
Protein accessionYP_001760591 
Protein GI170726565 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.312058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00138122 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTTAA CTAATGAGCA AGGTGAAGAA CTGAAAACCT ATCGAGTTTG GGATAGGCCA 
AGTCGGATAT TTCATTGGGT TAATCTATTT CTGGTCGTTA GCCTGATATT TGTTGGCTTG
TTGATGCTGT TTCGTAAAGA TTTAGGCATT AATGCACTGG AAGCCAAAAT TAAGTTAAAA
GAGCTGCATG TCGTTATTGG CTATCTTTTT GCTGGTAATC TTATCTTTAG GATCCTGTGG
GGTTTCATTG GCAGTCATTT TGCTCGGTTT AGTCACAATA TACCGAGCCT TAAAGCTATC
AAGGAGTATA AGTCAGCGTT AGATCGTGGA GAGAACCCAC AGTATATCGG TCACAACCCC
ATGGGGAAAT TAGCTGTCAT GGTTATCATG CTGATGTTAG TCGTGCTTCT CGCAACGGGG
TTATTTCGAG CTGGGACAGA TATCTACTAT CCCCCATTTG GCGGTACAAT TTCTGAATAT
ATCGCACAGG ATGGTGTGGA TGCTGCCAGT ATTAAACCTT ATGATGAAAC TGGCGTCGAT
AAAGCTAAGT TAGATGAGAT TAAGCCATAT AAAAGTATCG CGGGTAAGAT CCACCTTTAC
GGAGCCTATT TTTTAATTCT ATTAATCTTC ATTCACGTTA TTGCAGTGAT ATACGCTGAG
AGAAAGCATC AAGCGGGTAT AATCTCTGCC ATGTTCTCAG GTAAAAAGCG GATTGTTGGC
AAAGCTAAAG ACAGTGATAC TTAA
 
Protein sequence
MKLTNEQGEE LKTYRVWDRP SRIFHWVNLF LVVSLIFVGL LMLFRKDLGI NALEAKIKLK 
ELHVVIGYLF AGNLIFRILW GFIGSHFARF SHNIPSLKAI KEYKSALDRG ENPQYIGHNP
MGKLAVMVIM LMLVVLLATG LFRAGTDIYY PPFGGTISEY IAQDGVDAAS IKPYDETGVD
KAKLDEIKPY KSIAGKIHLY GAYFLILLIF IHVIAVIYAE RKHQAGIISA MFSGKKRIVG
KAKDSDT