| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2206 |
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| Symbol | |
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| ID | 6116476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2703263 |
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| End bp | 2705269 |
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| Gene Length | 2007 bp |
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| Protein Length | 668 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633714 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001760583 |
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| Protein GI | 170726557 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.370981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000519248 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGAATTAA TATCAAAAAA AGAGAGTCAA GCATTAACAC TGGACGCGAT AAAGACACCT
GCCATTGTGT TAGCGCTTTT ACTGCTTGTA ATGCACCACT CCTCTTTTGC GAGCGTGCCA
CTGACGACTA CTCTGACAAA GCCCAAACAG CTCCATGACT CTTTTGTTAA TAAGCAGGCT
GTTAATAAGC CAGTTGTTTA TCAAGTATTC ACCCGCTTAT TTGGCAATAA AAACAGCACC
AATAAGCCTT GGGGAACACT TGAGGAAAAC GGTGTTGGTA AATTTGCAGA TTTTGACAGC
GCCGCCCTAA AGAGCATTAA ATCTTTAGGT GTCACTCATA TTTGGTATAC GGGAGTTCCC
CATCACGCCT TAGTTAATGA CTACAGTGAG TTGGGGATAA GTATGGATGA TCCTGACGTC
GTCAAAGGGC GAGCCGGCTC CCCTTATGCG GTAAAAGATT ACTATAACGT CAACCCAGAT
CTTGCTATCG ATCCCGCCAA CAGGCTAGAT GAATTTATCG CGCTCATTGA ACGAACCCAC
AAGCATGGGA TGAAGGTGAT CATCGATATC GTGCCAAACC ATGTGGCAAG AAACTATCAC
TCCATTTCAA AGCCTGATGG CGTCACTGAC TTTGGACTAC ATGACAATAC CCAGCTTGAA
TATGCCAGAA ATAACAACTT CTATTATGTC GTTAATACGC CGTTTAACGT GCCTGATGTC
GATATCAAAA TACCATTAGG GGGGGAGTTC CATCCACTGA GCGATGGCAA ATTTAATGAG
CTTCCCGCCA AATGGACAGG CAACGGCTCC CGCTTGGCCA CGCCCAATGG CCATGACTGG
TATGAAACCG TGAAGATAAA TTACGGTATT AAACCTGATG GTAGCCACGA CTTCCCCACT
CTACCAAATC ATCTTGCCCA ACAAGATACC ACTGCTCATT TCGCCTTCTG GCAAGGGGTA
GATAAGCAAC GGCTCCCCAA CTCTTGGATT AAGTTCAAAC AGATCACTGA ATTTTGGCTT
AGTCTCGGCG TTGATGGCTT TCGCTATGAT ATGGCAGAGA TGGTGCCTGT CGCATTTTGG
AGCTACCTGA ACAGTAACAT TAAACAGATT AATCCTGATG CGTTCCTGCT CGCAGAGGTT
TACGACCCAA ACCTTTATCG TGATTATATT CATCTTGGCA AGATGGATCA TCTCTATGAC
AAAGTAGGAC TCTATGACAC CTTAAAAGCA ATTATTCATA GTAAAGAGTC AACCTCTGCC
ATCGAGATAG ATAGGTTAAA TGTGGCGGAT ATCGACAGTC ACATGGTGAA TTTTTTAGAG
AACCATGATG AGCAACGTAT CGCCAGCCCC GACTTTGCAG GTGATCCCAT TAAAGCCTTG
CCCGCCATGG TGGTTTCAAC CACAATTAAT CGTTCAGCAA CACTTATCTA TTTCGGGCAG
GAGCTTGGTG AAGATGGCAG TGAGAGCGCT GGATTTGGCT CTCCAACACG TACCAGTATT
TTTGACTACA TCGGCGTTCC CGCACATCAA GCTTACATGA ACGGTGGCAA GTTTGATGGT
GGACAATCTA CAGATGATGA ACTCAAACTA CGTGGTTTTT ATGCTCAGCT GTTAAATTTA
AGTCATAGTG CTCCAGCACT TTTGGGGGAA TATGCCCCAA TCACGACCAA GAATAATGCC
CTATTTGCCT TTGCCCGTTA CAGCCCATCT CAGCAGCTAC TTGTTGTCGT TAACTTCTCA
GACAAACCCC AAGATATAGC TCTTGTCATT CCAGCGCATC TAACTAAGCA ATGGCATTTA
ACACAAGCTA GCTATCAGTT AAGTGATCTG CTCAGTGAAG GGCCCCCTCT AGCTAGTGAA
CAGCTCACTA TTAAAGGCAA TAAAGCTGAG CTATCTCTGA AGTTACCGCC TTTTGGCTCA
AAAGTGTTGT CGATACAACA CAGGGCCAAC CAAGGTACTA TTAGTCAAGA TACTGTTAAA
CAAGATAAAG CTAACCAAGA CCACTAG
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| Protein sequence | MELISKKESQ ALTLDAIKTP AIVLALLLLV MHHSSFASVP LTTTLTKPKQ LHDSFVNKQA
VNKPVVYQVF TRLFGNKNST NKPWGTLEEN GVGKFADFDS AALKSIKSLG VTHIWYTGVP
HHALVNDYSE LGISMDDPDV VKGRAGSPYA VKDYYNVNPD LAIDPANRLD EFIALIERTH
KHGMKVIIDI VPNHVARNYH SISKPDGVTD FGLHDNTQLE YARNNNFYYV VNTPFNVPDV
DIKIPLGGEF HPLSDGKFNE LPAKWTGNGS RLATPNGHDW YETVKINYGI KPDGSHDFPT
LPNHLAQQDT TAHFAFWQGV DKQRLPNSWI KFKQITEFWL SLGVDGFRYD MAEMVPVAFW
SYLNSNIKQI NPDAFLLAEV YDPNLYRDYI HLGKMDHLYD KVGLYDTLKA IIHSKESTSA
IEIDRLNVAD IDSHMVNFLE NHDEQRIASP DFAGDPIKAL PAMVVSTTIN RSATLIYFGQ
ELGEDGSESA GFGSPTRTSI FDYIGVPAHQ AYMNGGKFDG GQSTDDELKL RGFYAQLLNL
SHSAPALLGE YAPITTKNNA LFAFARYSPS QQLLVVVNFS DKPQDIALVI PAHLTKQWHL
TQASYQLSDL LSEGPPLASE QLTIKGNKAE LSLKLPPFGS KVLSIQHRAN QGTISQDTVK
QDKANQDH
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