| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2126 |
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| Symbol | |
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| ID | 6116389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2602385 |
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| End bp | 2603410 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633629 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001760505 |
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| Protein GI | 170726479 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.128443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0489303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAG AACTTATGCA AGTCGCTGCA CTCAATTTAA AAAAAGCGGT CCCTTTGATG
CTCAAACATC AAATTCCCAC AACACCGACT AACTATGCGC TCTGGTACGC CTATGTAGGT
GAACAGCAAC CTCAGCTTAA TGAACAACTC GATACGATTA TTAATGAGCA CAGCACCTGC
CCTCCCTCAA ACTCAACACT GCTCTATCGT GAATTTGTTG CCGATCCGGT TGAACTAGAT
GTCATTGATA TGAGACAAAA CCTTGAAGCG ATGGCCACCG AGCTTTCTCA GTCTCTAAAA
GATACCAACA CAGACGCCAC ACACTTCCAA AAACGGATTG ACAGTAACTT TGATAAACTC
AACCGCATTG AGGAGGAGGG AGTCAGTCTT GAGAAAGTAT TGGGTGTGGT GCGAAACCTA
GTGAAGGAAT CCGATGAAAT ACGTTCGAGC ACTGAGTACT TTACTGGTCA TCTTAAACGG
GCCCAACAAG AGATTGATGC ATTAAAGGCG CAATTAAAGA AATCAGAAAA AGATGTCCTA
TTCGATGCTT TAACTGGCGT GTTGAACCGA AGAGCTTTTG ATTCAGATCT AAAGGGTTCC
CTAAGCCAAT CGCCAGATGG ACTCTGTTTG ATTCTTATCG ATATCGACCA TTTCAAAGCA
TTCAACGACA ACTATGGCCA CCAGTTAGGG GATCAAGTAC TAAAAGCCGT TGCTAAACGT
CTGGGGGAAT CTTGTAGAGA GGGAACCAAG CTGTACCGCT ACGGAGGAGA AGAGTTTGCC
GTTATCACAG CCAATAGCCA GTTAAGAAAA GCCAGGCACT TGGCAGAAGC GATGCGCAGA
GCCCTTGAGA AGGTCTCACT AAAAGACAGA CGAAAAGATG CCATGATCAA CAATATCACG
GCCTCTTTTG GTGTTGCACA ATGGGATCCT TCGCTCTCTG CCACCCAGCT AATAGAGCAA
TCGGATAAAC TACTCTACGA AGCTAAGCGG TTGGGCAGAA ACCGAGTAAT GCCTATTGCC
AGCTAA
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| Protein sequence | MSKELMQVAA LNLKKAVPLM LKHQIPTTPT NYALWYAYVG EQQPQLNEQL DTIINEHSTC
PPSNSTLLYR EFVADPVELD VIDMRQNLEA MATELSQSLK DTNTDATHFQ KRIDSNFDKL
NRIEEEGVSL EKVLGVVRNL VKESDEIRSS TEYFTGHLKR AQQEIDALKA QLKKSEKDVL
FDALTGVLNR RAFDSDLKGS LSQSPDGLCL ILIDIDHFKA FNDNYGHQLG DQVLKAVAKR
LGESCREGTK LYRYGGEEFA VITANSQLRK ARHLAEAMRR ALEKVSLKDR RKDAMINNIT
ASFGVAQWDP SLSATQLIEQ SDKLLYEAKR LGRNRVMPIA S
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