| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2048 |
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| Symbol | |
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| ID | 6116311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2513891 |
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| End bp | 2514781 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633551 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001760427 |
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| Protein GI | 170726401 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00991074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0337904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGATA GATTTATAAA ATGCATAGCT CAGTTACCAA AACCGTTATC AGATGCATTG
ATCCCCCTGC TCAATGCCGA TTTTGCCGGA CATATCGATG CTCAACAGCT AGGCATGCTA
ACAACAAAAA GTCAGCTAGA GGAGAGTGAG CTTCTGCTGG CTCTGCTTCC TATTGCAGCC
GCCCTTGCTA AGCCTCCCAT TAGTGAGTTC TATGTAGGTG CCATCGCCAA GGGTAAGAGT
GGTGATATCT ATATGGGTGC CAACCTTGAG CTTTCGGGAG AAGCGCTGTT TCATTCAGTG
CACGCAGAGC AAAGCGCTAT TAGTCATGCT TGGCTCAGTG GTGAAACTCA GATCTTAGAT
GTGGTGGTAA ACTTCTCTCC TTGTGGGCAC TGCCGCCAAT TTATGAATGA GATGGTAGAG
GGACAGAAGG TGGTAATTCA TCTACCTGAG CAGAAAGCTC AGCCTCTTGC ACATTACCTC
CCCTACGCTT TTGGTCCAAG CAATCTTAAT ATTACCGAGC CTCTGTTATC TAAACAGCAA
CATGAACTTA GCCTCGATAG CTCAGATCCC ATGATCATCG AAGCATTGGA TCATGCAAGT
TTAAGTTATG CGCCATATTC CAACAGCTAT GCAGCCGTTG TTCTTGAAAC TAAAGATGGT
GCGACCTACT GTGGACGTTA TGCAGAAAAT GCAGCATTTA ACCCCTCGAT GCTACCAATG
CAGATGGCAC TCTCAACGAT GACCAGACAC AATCGAGAGT TTACAGAGAT TAATCGTGCA
GTCCTTATCG AATCGGCTCA AGGAAAGATC TCATTAGTCG GTGCGACTAT GGATGCGCTG
CACGCTGTCG CAGCTGTTGA GTTGGAACAT ATTGTGATTG ACCCAGCCTA A
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| Protein sequence | MQDRFIKCIA QLPKPLSDAL IPLLNADFAG HIDAQQLGML TTKSQLEESE LLLALLPIAA
ALAKPPISEF YVGAIAKGKS GDIYMGANLE LSGEALFHSV HAEQSAISHA WLSGETQILD
VVVNFSPCGH CRQFMNEMVE GQKVVIHLPE QKAQPLAHYL PYAFGPSNLN ITEPLLSKQQ
HELSLDSSDP MIIEALDHAS LSYAPYSNSY AAVVLETKDG ATYCGRYAEN AAFNPSMLPM
QMALSTMTRH NREFTEINRA VLIESAQGKI SLVGATMDAL HAVAAVELEH IVIDPA
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