| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1980 |
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| Symbol | |
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| ID | 6116243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2438164 |
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| End bp | 2438979 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633483 |
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| Product | aminodeoxychorismate lyase |
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| Protein accession | YP_001760359 |
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| Protein GI | 170726333 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0416035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00481294 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACAAG TGTGGGTTAA TGGTGTGCTG GCCAAAGAGA TCGACCCGTT AGACAGAGCG
ATAGCATACG GTGATGGTCT GTTTGCCACA ATGCGCATTG CTGCTGGAGA GATACAGTTT
CTATCGGCGC ACCTTGCCAG ATTAACTCAG GGAGCCAAGC GTTTAGGTTT TACTTGGTTT
GCTTCACAAG AGCTTCAAAG TCTGCTTAAG TCATCGGCGT TAACTCAGGT TAACGGCTGT
GTTAAGTTGC TGCTCAGTCG CGGTGTTGGT GGCCGAGGTT ACGCCGCGCC AGATGCTTGC
GGTATTAATG AGGTACTCTC ACTTTATGAG TTGCCGCAAC ATTACGCTCA TTGGCAAAGC
GAGGGCGTAT CACTGAGCTT GAGTGAGGTT AAATTAGCAA AGCAGCCAAG GCTTGCTGGA
ATTAAACACC TTAACCGCCT AGAGCAGGTG CTGATCAAAT CGACGGCGCT ACCAAGCTCG
TTTGATGACT GGCTAGTGCT CGACAGTGAT AGCCAAGTTG TTGAATCATC CATGGCTAAC
CTCTTTTTTG TTAAGAATAA AACTGTTTTT ACCCCAGCGA TTAGCCACTC AGGCGTTGCC
GGAGTGATGA GGGAACAATT GATTTTTGCT TTAGTTGAGT CTGGTTATCA TATTGATATT
AAGCAGATAA GCTATGCCGA TATTAACAAG TTCGATCACT GTTTTATGAC CAATAGCCTT
TTTGGGCTGG TGGATGTAAA CCGTATTGGT ACCATCAACT ATTCTAAATA TTCACTTTCA
GACAGATTGA GAAATACTCT GCAACTTACC CTATGA
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| Protein sequence | MTQVWVNGVL AKEIDPLDRA IAYGDGLFAT MRIAAGEIQF LSAHLARLTQ GAKRLGFTWF
ASQELQSLLK SSALTQVNGC VKLLLSRGVG GRGYAAPDAC GINEVLSLYE LPQHYAHWQS
EGVSLSLSEV KLAKQPRLAG IKHLNRLEQV LIKSTALPSS FDDWLVLDSD SQVVESSMAN
LFFVKNKTVF TPAISHSGVA GVMREQLIFA LVESGYHIDI KQISYADINK FDHCFMTNSL
FGLVDVNRIG TINYSKYSLS DRLRNTLQLT L
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