| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1918 |
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| Symbol | |
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| ID | 6116181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2364589 |
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| End bp | 2365368 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633421 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001760297 |
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| Protein GI | 170726271 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0612288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGT TAATCAATGT GCACGCTTTT AAAAGCTCGC AACCACAAGC ATTAAGAGAC
GTTCCCATCT ATATTCCCAG TATTGTTGTG ATACAAGCGG GGGCTAAACT GCTGAGTTGG
CAAAGTGATA CGTTAACGTT CGAGAGGGGG ACTTGGTTGT TTGCTCATGC TGAGCAATCG
CTTACTTTTA TTAATCACCC TGCTAATTTT ACATTTCGCT CAATTCAAAT TTGTTTCTTA
TCGCCTCCTT CCTCAGCGAT TATGGAGTCG ATGGTTGATG AGAGAGGGAG GCGTTTAACC
AAATCACCTA AAGTGGTCTC TAATACAAAG CTTGATTTTG CTTTGAAACA GCTACTTGCT
ATGCAAGAGC TGGACTTTAC CGAGCAGACT CAGCAACACT ACCTTGATGC CTTTTATCAA
ATACTGTTAG AAGCTGGGTT ACTGCAGCTG CTTTTCCCTG GGGCTGATCT TTCAATGCGA
GAGAGGGTAT GTCGGTTTTT GAGTAATGAG CCCGCTAAGG CTCATTCCAT TGATGAGCTT
TGTACACACT TAGGCCAGAG TCGATCGACG TTAACACGAC GGTTAGCTGA TGAGAGTACC
AGTTATCGTG AACTCTTAAG TGAGACTCGT ATGCTCCATG CGCTCAGTTT GATGCAGACC
AGACCCTACA AGCAGTTGGA GCTGGCATTG GCCTGCGGTT ATCAGTCTGA AACTCGCTTT
GGTCAACGTT TCCTTAAGCA GTTTGGACTC ACTCCTAAGC AGTATATGAA GACGCTTTAA
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| Protein sequence | MAKLINVHAF KSSQPQALRD VPIYIPSIVV IQAGAKLLSW QSDTLTFERG TWLFAHAEQS
LTFINHPANF TFRSIQICFL SPPSSAIMES MVDERGRRLT KSPKVVSNTK LDFALKQLLA
MQELDFTEQT QQHYLDAFYQ ILLEAGLLQL LFPGADLSMR ERVCRFLSNE PAKAHSIDEL
CTHLGQSRST LTRRLADEST SYRELLSETR MLHALSLMQT RPYKQLELAL ACGYQSETRF
GQRFLKQFGL TPKQYMKTL
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