| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1827 |
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| Symbol | |
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| ID | 6116090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2256692 |
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| End bp | 2257567 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641633330 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001760206 |
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| Protein GI | 170726180 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.021079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCATA TGATGAACAC TCGTTTACTG CTCAGTGTAA GCTTAAGTTA TCTACTCACA
ACCTCTGCGT TTGCAAACGA TGACAGATTT AAAGATGTGG AGATAACACC TCAGCAACTA
ACAGAAACCA GTTACATGTT TACAGGCTCA GGTGGCAATA TTGGCGTTTC TGCCGGCAGT
GACGGTATCC TTATCATAGA TAATCAATTT GCACCTCTAG CCGATAAGAT CTCTGCGGCT
CTATCAAAAA TACAAACAGG TAAACCCAAA TATGTGGTCA ATACCCACTA TCACGGGGAT
CATACTGGGG GCAATAATCT ATTTGGCATT GATGGGGTAA TTTTAGCCCA CCATAATGTG
CTCTCTCGTC TCTCTGGCAA CACAAGCTAC ACACCTGAAG GTTTACCTAG CATCACTTAC
CATGAAGGTA TTAACATACA TTTTAATGGG GAAAACCTTC AGCTGTTACA TATGGGGCCG
GGCCACACTG ACGGCGACAG TATTGTGCTT TGGCAGGACA AAAGCGTCCT CCATATGGGA
GATCTTTTCT TTAAAGATAG GTTTCCCTAT ATCGATCTCA ACGCTGGCGG CTCCGTTAAA
GGCTACCGTA ACAATGTCGC TGCGATGATC CGCAAAATTG ATGATGAAAC CAAGGTGATC
CCAGGCCATG GATCACTTGC AACTAGAAAT GACCTGATCC GATTTAAGCA TATGCTTGAT
GCATCCATCA ATTGGATGGA GAGCAAGTTG CAAGCACAGC AGACCCTTGA TGAGATCCAA
GCTGAAGGTA TGCCTGAGAA ATGGCAAGCT TGGGAGTGGA GGTTTATTTC AGAGAAAAAA
TGGATAGACA CTCTCTATAA CGGGCTAAAA AAATAG
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| Protein sequence | MAHMMNTRLL LSVSLSYLLT TSAFANDDRF KDVEITPQQL TETSYMFTGS GGNIGVSAGS
DGILIIDNQF APLADKISAA LSKIQTGKPK YVVNTHYHGD HTGGNNLFGI DGVILAHHNV
LSRLSGNTSY TPEGLPSITY HEGINIHFNG ENLQLLHMGP GHTDGDSIVL WQDKSVLHMG
DLFFKDRFPY IDLNAGGSVK GYRNNVAAMI RKIDDETKVI PGHGSLATRN DLIRFKHMLD
ASINWMESKL QAQQTLDEIQ AEGMPEKWQA WEWRFISEKK WIDTLYNGLK K
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