| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1801 |
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| Symbol | |
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| ID | 6116064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2224288 |
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| End bp | 2226801 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641633304 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_001760180 |
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| Protein GI | 170726154 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0716764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000241302 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGTCAG CATATAAAAT ATTTACCGCA TTCTTTTTGT CTTTTTTTAT TATTGCATGT
AGTGGTGGAG GGGGGATTTC TGATGAAGGA AGTGGTGGAA CTACACCTCC TGTAACTATA
TCTATCACAC TAGAAGTTGA TAATGACCAA ATATCAGTCG CAGAGCCTGG TACATTAACT
GCAACTGTGA GGGATTCTAC TGGTGCAGCA GTCAGTACCT TAGTCTCTTT TACTTTAAAT
AATGATTCAT ATGGAACATT TGATCCTGGT ACCGGAGAAG TTTCAACAAA TGCTGATGGT
GTTGCAACAA TTAAGTTGAA CACTGCTGCT ATCAATACTG GAGCAAGTAT TACTGCGACG
ACAGGGACGG GAGAGACCGC TTCTGTTAAT GTCACTATGG TTGGTGATGG TGGTGAAGCT
GGCGGTGGAG CACAAGTTTC ATTGGTATTA ACTGACTCAG CAGGTACTCC AATTCAAACG
ATTAGTACAC TATCTCCAGG TAAGTTAACA GCAACAGTCA CGGGAATTAA TAAGTCAGTT
ATTGTGACAT TTGAGAGCCC TATTGGAGAC TTACCAATTA AGAGCGCGGT AACAGATTCT
GAAGGTAAAG CTACTGTTGA CATATATGCT GGAAGTTCAT TAGGCGCTGG AGAGGTGACG
GCAAGTTTAG CAACTAATGA AGTTGGTAAA ACAATTGTGG TGGTTGGTGC GACTAATGTG
GTAATGGGAA GTGGTACCCC TTTCACTGAA GGAGTCGCTG AGGTCAGTAC TACTAACTTA
TCTGCTGGCG GTACCGCAAC AATCTCTGTT CAAATACAAG ACGATAAAGG CAACCCATTT
ACGCAGCCCG TTGATGTGAA TTTTTCATCG ACTTGTGCGA CGAAAACACC TGCTCAAGCA
CAAATTAGTT CACCCGTTTC ATCAAGTAAT GGTTTAGCGA CGTCTACATA TCTAGCTCAA
GGTTGTGTCG GAGAAGATCA GATTAATGTT ACAGCTAATG CCGGTGGAAT TAGTCTTTCT
GCCGTTGGAA CGATTAATGT GTTACAAGCC GATGTTGGTA GCATTGTTTT TGTATCTGCA
GAGCCTGAGA ATATAGGCAT TTTAGGTACT GGTGGTGTGG AATCATCAGT CGTTAAATTT
AAAGTGCTTG ATAAAAACAG CAACCCTGTT AGCAATCAAA ATGTGTTGTT TGAGTTAAAT
ACAATCATAG GTGGCGTTGC GTTAACTCCT GCTCAAGCGA CAACAAATAA TGAGGGTATC
GTTCAAACTG TTGTAACTAC AGGTACCGTG GCTACATCGG TAAGAGTGAC AGCAACGGTT
GATGGTTCTA ATCCTGTTAT TTCAAGTCAG TCTAAACAAT TAATTATCTC TACTGGTATT
CCTGATCAAG ATAGTTTCTC ATTATCAGCA GAAATGTTAA ATGCTGAGGG GTGGGTTGTT
GAAAATACTG AGGTTAAGGT CACTGCTCGT ATGGCAGATG CCTTTAATAA CCCTGTTCCA
GATGGAACTA CAGTATCATT TACAACTGAA GGCGGTGCGA TTGAAGATGC TTGTCAAACT
ATAAATGGTG CCTGTTCAGT AACTTGGGTT AGTCAGTTAC CAAGGCCTGA GGGGCAAGAG
CTATTTAATG AGCAAGGAGT ACAAATTCGC AACCCAACTG CTGCACTTCG ATGCCATGTA
CTCAAAATTA ATGAGACTGA TTCCGGTGTT TGTGATATTA ATAATGATGC GCAAACAAGG
ATATATGGTA ACTTTTATGA CCAGAAATAT GGTGGTCGAG CGACGATCAC CGCTACGGCA
ATCGGTGAGG AATCATTCCC AGATCTGAAT GGTAATGGTC GTTTCGATGC CAGTGAAATG
AATGAGTTTT TGACAGGTAA AGATGTCAGT GGGGAATCTT TTGACTTGAA TGACGCTTTT
AATGATTACA ATGAAGATAG CGTATTTAAT CCTCAACCTG ATGGTCAACT AATTGGATTT
GAAGGTGGTG CATTAGAAGA GTTGGTAGAT TTCAATTCAA ATACAATATT TGACTTAAAA
GATGGGGTTT ATAACGGTGT ACTTTGTTCT GAACCTGCTC ATGCAGGCTG TGCTGATGGT
GTTTCAGACT CTAAAACATT ATTTGTAAGA CGAAGCTTAG TGATGGTGAT GTCTGGTAGT
AAAGCTGTCG GAACGCTTCC TAATGACATT TTTATCAGAG ATAAAGATGG CGATCATTTT
GGTGGCAGTA TTAATATAGT GGGAAAAGGA GCTGCGATAG TGATTTTTAC TATTTCAGAT
CTGCATAACC AGCAGATGCC AGCAGGTTCT AAAGTTAGCT TTTCATCAAG TGCAGGCTCT
GTAAGCAGCA CAAGTGAAAT TATATGGCCA AGCTCTAACT ATAATGGAGG TACCCAATTT
AAGGTTAGCC TTAAAGGTGA AGATGAGCCG AATTCAGGCG TATTCAGTGC AGTGGTTACT
ACACCTAATG GCACTATCAC CGAGGTGGTG AATATTGCGG TTAATATTCT ATAG
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| Protein sequence | MQSAYKIFTA FFLSFFIIAC SGGGGISDEG SGGTTPPVTI SITLEVDNDQ ISVAEPGTLT
ATVRDSTGAA VSTLVSFTLN NDSYGTFDPG TGEVSTNADG VATIKLNTAA INTGASITAT
TGTGETASVN VTMVGDGGEA GGGAQVSLVL TDSAGTPIQT ISTLSPGKLT ATVTGINKSV
IVTFESPIGD LPIKSAVTDS EGKATVDIYA GSSLGAGEVT ASLATNEVGK TIVVVGATNV
VMGSGTPFTE GVAEVSTTNL SAGGTATISV QIQDDKGNPF TQPVDVNFSS TCATKTPAQA
QISSPVSSSN GLATSTYLAQ GCVGEDQINV TANAGGISLS AVGTINVLQA DVGSIVFVSA
EPENIGILGT GGVESSVVKF KVLDKNSNPV SNQNVLFELN TIIGGVALTP AQATTNNEGI
VQTVVTTGTV ATSVRVTATV DGSNPVISSQ SKQLIISTGI PDQDSFSLSA EMLNAEGWVV
ENTEVKVTAR MADAFNNPVP DGTTVSFTTE GGAIEDACQT INGACSVTWV SQLPRPEGQE
LFNEQGVQIR NPTAALRCHV LKINETDSGV CDINNDAQTR IYGNFYDQKY GGRATITATA
IGEESFPDLN GNGRFDASEM NEFLTGKDVS GESFDLNDAF NDYNEDSVFN PQPDGQLIGF
EGGALEELVD FNSNTIFDLK DGVYNGVLCS EPAHAGCADG VSDSKTLFVR RSLVMVMSGS
KAVGTLPNDI FIRDKDGDHF GGSINIVGKG AAIVIFTISD LHNQQMPAGS KVSFSSSAGS
VSSTSEIIWP SSNYNGGTQF KVSLKGEDEP NSGVFSAVVT TPNGTITEVV NIAVNIL
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