| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1587 |
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| Symbol | |
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| ID | 6115827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1977440 |
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| End bp | 1978654 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641633069 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001759968 |
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| Protein GI | 170725942 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCAAA CCATCGGTAG CACAATGACA AACACCTTAA AGCTAATTGG AAGAGAGAAA
GAACTGTTTA CTCAAGATAT TGGGCATTAC AAGGCTCAGT TAATCGATGA GGTTAGTCAG
TCTCGTTTTC TCGTTCTAGG TGGTGCAGGC TCTATTGGTC AGGCTGTGGT AAAAGAGATT
TTTAAGCGTG TTCCATTAAA GTTACATGTC GTCGATATCA GCGAGAATAA CTTAGCTGAG
CTAGTCAGAG ATATACGCAG CTCTTTTGGG TACATCAATG GGGACTTTCA AACCTTCGCG
CTCGATATCG ACTCGATAGA ATATGACGCG TTTATAGCTC AAGATGGTCA GTATGATTAT
GTACTCAATC TATCTGCACT TAAGCATGTC AGAAGCGAAA AAGATCCCTT CACCTTAATG
CGCATGATAA ATATCAATAT TTTCAACACC GATAAGACAA TTGAGCAATC GATAGCCTCT
GGTGTGAAGA AGTACTTCTG TGTATCAACC GATAAAGCCG CCAACCCAGT CAATATGATG
GGTGCCTCTA AACGTATCAT GGAGATGTTC CTGATGCGTC GCAGTGAAGA GATGACAATA
TCAACCGCAC GTTTTGCCAA TGTGGCGTTC TCTGATGGAT CATTGCTACA TAGTTTTAAT
CAGCGCATGT TAAAGCAACA ACCTATTGTT GCCCCGACAG ATATTAAACG TTACTTTGTC
ACCGCTCAAG AATCTGGCGA ACTCTGTTTA ATGTCTTGTA TTTTTGGTGA AAATCGAGAT
ATTTTCTTTC CCAAACTTGA TGAAGAGCAA CATCTTATTT CCTTTGCTGA CATCGCCGTA
AGGTATCTTT CATCTAGAGG CTATCAAGCC CATATTTGTC AAAGTGAAGA TGAGGCACGG
CAATTGGCTG CCACACTGCC AGCTAAAGGC ATTTGGCCAT GCTACTTCAC CGTCAGTGAT
ACAACTGGTG AGAAGGAGGT TGAGGAGTTT TTTACCGCAC AAGAAACCCT GGATATGGCT
AGATTTTCGG AGCTGGGGAT CATCAAGAAT AGACTAAAAT ACGACCCAAA ACTACTCGAG
TTATTCGTAC AAGAGATCGA ATCAATGAAG TTAGCCAAGT CATGGAGTAA AGAGCAAGTA
GTCCAGCTTT TTCATCTTAT GCTGCCTGAG TTCGGCCATA AAGAAACAGG AAGGTCTCTT
GATGAAAAAA TGTAA
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| Protein sequence | MHQTIGSTMT NTLKLIGREK ELFTQDIGHY KAQLIDEVSQ SRFLVLGGAG SIGQAVVKEI
FKRVPLKLHV VDISENNLAE LVRDIRSSFG YINGDFQTFA LDIDSIEYDA FIAQDGQYDY
VLNLSALKHV RSEKDPFTLM RMININIFNT DKTIEQSIAS GVKKYFCVST DKAANPVNMM
GASKRIMEMF LMRRSEEMTI STARFANVAF SDGSLLHSFN QRMLKQQPIV APTDIKRYFV
TAQESGELCL MSCIFGENRD IFFPKLDEEQ HLISFADIAV RYLSSRGYQA HICQSEDEAR
QLAATLPAKG IWPCYFTVSD TTGEKEVEEF FTAQETLDMA RFSELGIIKN RLKYDPKLLE
LFVQEIESMK LAKSWSKEQV VQLFHLMLPE FGHKETGRSL DEKM
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