Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1340 |
Symbol | |
ID | 6115580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1690729 |
End bp | 1691298 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641632828 |
Product | hypothetical protein |
Protein accession | YP_001759727 |
Protein GI | 170725701 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00506631 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000123504 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACAAG TTAAAGTAGT TTTGGCTGCA CTATCACTCT GTGCGCTTAG CGCGTGTAGC TCAATGAAAA CAAGTTCAGA TTATGATCCT GCGGCTAATT TCAGTGATGT CAAAACCTAT GCTTGGGTAG AGAAGAAGAC GCAAGATAGC AGTTATCATC TGGATGGGTT AATGGATCAG CGTGTTCGTA GTGCTGTTGA CAGTCAATTG TCGCTTAAGG GGGTTAAGTT AACCGAACCA TCTACAGCGG ATGTGTTGGT TAACTACCTC ACTAAAGTTG ATAAGAAGAT AAATGTTGAT ACTTTCAATA CCAACTATGG TTATAACCCA TATTATGGTC CTCGCTGGGG CATGAGTGGC TCTATGCATA CCCAAACTAC AGTTCGTGAA TATGAAGTGG GTACATTGAT CTTAGATATG GTTGATAGGG AGTCAGGAAA GCTTATCTGG AGAGGCTCTG TTGCCGATAC TATCCGTGAT AAAAATACTC CAGAGGAGCG CATTGAGGTG GTTAATCAAG CAATCGCTGC CATGTTAATG AATTACCCTC CAAAGCCAGA AGCTAAATAG
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Protein sequence | MKQVKVVLAA LSLCALSACS SMKTSSDYDP AANFSDVKTY AWVEKKTQDS SYHLDGLMDQ RVRSAVDSQL SLKGVKLTEP STADVLVNYL TKVDKKINVD TFNTNYGYNP YYGPRWGMSG SMHTQTTVRE YEVGTLILDM VDRESGKLIW RGSVADTIRD KNTPEERIEV VNQAIAAMLM NYPPKPEAK
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