Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1325 |
Symbol | |
ID | 6115565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1678096 |
End bp | 1679940 |
Gene Length | 1845 bp |
Protein Length | 614 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641632813 |
Product | hypothetical protein |
Protein accession | YP_001759712 |
Protein GI | 170725686 |
COG category | [S] Function unknown |
COG ID | [COG4805] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0980607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAATAA AAACAAAAAT AAGCTTAGTA GCCTTAACAT TAACAACACT TATCGGAGGA TGCGGCGTAT CTTCCACTCC CCCATCTGAG CCTCAATCCA TTGAAAACGC AGTAGTAATA ATCAGCGAAT CAGAGAAAGC CAACGCGCTA TTTGAAACCA TATTTATGGA CAATGTGATG GCAAGCCCCA TCTCTCAAAC ACAGTTAGGC ATAAAGAAAG ACTACGGGAA ATGGGATGAG AGAGGGGAAG TCGCAGATGC TAAAGAGCTT GCCCTCACCC AAGCACATCT CAAACAACTT AAGCAGATAG ATGTCAGTAA GCTCGATGAT CAAACCAGCC TAAGCTATGG CCTACTCAAA CAGAGGCTGG AAAACGAGGT CGCGGATAAT AGATGGCGCT ATTACAGCTA CCCAGTCAAT CAGATGTATG GTGGCCACTC GATGCTACCC TCATTTTTAA TTAACCAACA TCAAGTCGGC ACTGTCGAAG ATGCTAACGC CTATATCAGC CGCCTAAACG GCATTCCTAA ATACCTTAAG CAGCTTGAAG AGTCCTTAGA AGCTCGTGCA CAGCACGGAA TTATCGCACC TAAGTTTGTG TTTCCACATG TACTCTCTGA TAGTAAAAAT ATCATCACAG GTGCACCTTT CGATTCTGGT AAAGACAGTG CTCTCTGGGC AGATATAAAA CGTAAAGTCG ATGGGTTAGA GATTGATAAC AGCAAAAAAG AGACATTACT AAAAGAAGCT AAACATGCTC TAATCTCTCA AGTGCAACCT GCATATAAGA AGCTTGTCAC TTATCTTACT CAGCTTGAGA CACAGGCAGA TACTCGTGAT GGAGTCTGGA AGTTTCCTCA AGGTGAAGAG TTCTACAACA ATGCACTTGC TCGAACGACC ACCACAGATT TAACCGCAGA TCAGATCCAT CAGCTAGGTC TAGATGAAGT AGTCCGTATC CATAATGAGA TGCGTGTGAT CATGAAAAAA GTTGGCTTTA AAGGCGATCT ACAGGCTTTC TTTAAATTTA TGCGTGAAGA TAAACAGTTT TATTACCCTG CAACCGATGA GGGACGTGAT GCTTACCTAA AAGATGCCAC GGCGCTTATC GATAACATGT CATCTAGGCT TGATGAAGTA TTTAATGTCA AACCTAAAGC TCCCATGATA GTTAAGCGAG TGGAAGCCTT TAGAGAGAAG TCAGCAGGAA AAGCCTTCTA CAATCAATCA TCGCCCGATG GAAGTCGCCC TGGTACCTAC TACGCTAACC TATATGACAT GGATGCTATG CCAAAATACC AGATGGAAGC ACTAGCCTAC CATGAAGGAA CCCCAGGGCA TCATATGCAG ATAGCCATAG CACAAGAGCT TGAGGGGATA CCTAAGTTCC GTAAGTTTGG TGGTTATACA GCCTATATTG AGGGCTGGGG ACTTTACAGT GAATTCTTCC CTAAAGAGAT GGGGCTTTAC TCTGATCCCT ACTCAGATTT TGGTCGCCTT GCGATGGAAC TTTGGCGCTC ATGTCGCTTA GTCGTAGATA CAGGCATACA TGCTAAAAAG TGGACCCGTG AGGAGTCTAT TAACTACTAC GTCAATAATA CCCCTAATGC AAAGTCAGAT GCGGTGAAGA TGGTAGAGCG TCATGTTGTC ATGCCCTCAC AAGCCACAGC CTATAAAGTG GGAATGTTGA AAATACTCGA CCTAAGAGCA AAGGCTAAAC AATCACTGGG GGAGAAGTTC GATATCCGCG AGTTTCATAC CTTAGTGTTA AAAAACGGTC CGCTTCCTTT AGATGTTCTC GAAGATCAAG TTGATCTCTG GGTTAGTGAG AAAAAGAGGG GTTAG
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Protein sequence | MPIKTKISLV ALTLTTLIGG CGVSSTPPSE PQSIENAVVI ISESEKANAL FETIFMDNVM ASPISQTQLG IKKDYGKWDE RGEVADAKEL ALTQAHLKQL KQIDVSKLDD QTSLSYGLLK QRLENEVADN RWRYYSYPVN QMYGGHSMLP SFLINQHQVG TVEDANAYIS RLNGIPKYLK QLEESLEARA QHGIIAPKFV FPHVLSDSKN IITGAPFDSG KDSALWADIK RKVDGLEIDN SKKETLLKEA KHALISQVQP AYKKLVTYLT QLETQADTRD GVWKFPQGEE FYNNALARTT TTDLTADQIH QLGLDEVVRI HNEMRVIMKK VGFKGDLQAF FKFMREDKQF YYPATDEGRD AYLKDATALI DNMSSRLDEV FNVKPKAPMI VKRVEAFREK SAGKAFYNQS SPDGSRPGTY YANLYDMDAM PKYQMEALAY HEGTPGHHMQ IAIAQELEGI PKFRKFGGYT AYIEGWGLYS EFFPKEMGLY SDPYSDFGRL AMELWRSCRL VVDTGIHAKK WTREESINYY VNNTPNAKSD AVKMVERHVV MPSQATAYKV GMLKILDLRA KAKQSLGEKF DIREFHTLVL KNGPLPLDVL EDQVDLWVSE KKRG
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