| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1286 |
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| Symbol | |
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| ID | 6115521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1631105 |
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| End bp | 1632505 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641632769 |
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| Product | peptidase M28 |
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| Protein accession | YP_001759673 |
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| Protein GI | 170725647 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2234] Predicted aminopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000415736 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.392366 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACT ATCGTCGTAC CTTACTCATG GCTTCTCTTT TAGTGCCACT TTTATCCTGC
CAACACACAC AGCCAAAATC GGAAAACATT CAGATTTCCG AACAGTTACA GCAGCAAGCT
CTCGCCTCCT CCCTGGCCTA TGATCTTGTC GAATCTCTCA CCGTAGAGGT TGGGCCAAGA
TTAGCAGGCA GTGAAAAAGA TCTTATTGCC GTTCAGTGGG CAGAAGATAA ATTAACAACA
CTCGGTTTCG ATAAGGTTTA TAAGGAGCCA GTAAAAGTCC CTGTATGGGA TAGAGGTGAT
GCCAAAGCGA TGGTGGTCGC CCCCTATCCT CAAGGCTTAG TCATCACAGC CCTAGGTGGC
AGTGTCGCCA CACCAATTGA CGGGATCACC GCCCCTATTG TCCGTTTTGA TACCCTCGCC
GCACTCAAAG CAGCACCAGA GGGAGCATTA ACAGGAAAAA TAGCCTTCAT CGACCATAAA
ACTGAGCGAC ACACCACAGG CAAAGGCTAT GGCAAAACGG TAGGCGGACG TTCACGGGGC
GCAGTGGCAG CCGCTTCCAA AGGCGCCTTG GCCATTGTTA TTCGCTCCAT AGGCACAGAT
CATGACCGTA TGGCTCACAC TGGTGCAATG CGCTATCAAG ACGATGTGCC GCGTATTCCT
GCCGCCGCAT TATCATCACC CGATGCTGAC CAACTCAACT TAATGCTAAA ACGAGATGAG
AATGTAGTGC TGCAGCTTAA GATGTCACCA CAAAGTCATG GATACGCTAC TTCCTATAAT
GTTATCGCCG AGGTAACTGG TGCCACAAAG CCCGATGAGA TAGTGCTTAT AGGCGCACAT
TTAGACTCGT GGGATGAGGG CACAGGCGCA TTGGATGACG GGGCAGGAGT CGGTATCGTG
ACAGCGGCAG GTAAACTTAT TCAAGACTTA CCACAAAAAC CTGCCAGAAC CATTCGAGTC
GTACTTTACG CAGCAGAAGA GCTTGGCCTG ATTGGCGGTA AAGCTTACGC CAAAGCCCAT
AAAGATGAAC TTGCAAAGCA CTATATCGCC GCAGAGTCTG ATTTTGGCGC AGGGCTTATC
TACCAGATCG ACTACCGCGT CTCAGAGCAG GCCTTTAAAG ATGTGCTAGC GATTAGCAAA
CCTATGACAG CAAATGGTGT CGCAATGGGC ACCAACACCG CCTCTGGTGG CCCAGATGTC
TCTATGCTGC CTAAACAAGG CGTCCCAGTC GCATCATTAA GGCAAGATGG CCGAGACTAT
TTTGATTATC ACCACACCCC TAATGATACG TTAGATAAGG TTAATCCCGA ATCGTTACAG
CAGAACGTGG CAGCCTACGC ACAGTTTGCT TATCTAATGG CTCAATCAGA GATTGATTTA
CGTCCCTTGG CAACTAAGTA G
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| Protein sequence | MQNYRRTLLM ASLLVPLLSC QHTQPKSENI QISEQLQQQA LASSLAYDLV ESLTVEVGPR
LAGSEKDLIA VQWAEDKLTT LGFDKVYKEP VKVPVWDRGD AKAMVVAPYP QGLVITALGG
SVATPIDGIT APIVRFDTLA ALKAAPEGAL TGKIAFIDHK TERHTTGKGY GKTVGGRSRG
AVAAASKGAL AIVIRSIGTD HDRMAHTGAM RYQDDVPRIP AAALSSPDAD QLNLMLKRDE
NVVLQLKMSP QSHGYATSYN VIAEVTGATK PDEIVLIGAH LDSWDEGTGA LDDGAGVGIV
TAAGKLIQDL PQKPARTIRV VLYAAEELGL IGGKAYAKAH KDELAKHYIA AESDFGAGLI
YQIDYRVSEQ AFKDVLAISK PMTANGVAMG TNTASGGPDV SMLPKQGVPV ASLRQDGRDY
FDYHHTPNDT LDKVNPESLQ QNVAAYAQFA YLMAQSEIDL RPLATK
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