| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1224 |
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| Symbol | |
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| ID | 6115459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1561787 |
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| End bp | 1562698 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632708 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001759612 |
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| Protein GI | 170725586 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000272647 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00900481 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGCACT TACCCAGTTT GAAAAACCTC TTTTATCTCG TGAACCTCTA TCAGGAGCAG
AATTTTAATC GTGCTGCTAA GATGTGTCAT GTTAGCCAGT CTACTCTCTC TAGCGGGATA
CAAAACTTAG AGGAGCAGCT TGGCCATCAG CTAATTGAAC GGGATCATAA ATCATTTATC
TTTACGGCTA TTGGTGAAGA GGTGGTACTG AGATCGCGCA AGCTACTCAC CGATGTTGAT
GATCTTGTTG AGCTGGTTAA GCACCAAGGC GAGCCAATGA CAGGGGATAT TCGCTTAGGC
TGTATTCCAA CGATTGCTCC TTTTCTGTTG AGCCGAGTGG TTAAACAGTG TCAGCAAACC
TATCCGAATC TCACTATGTT TTTAAAAGAG GATACGACTG AGAGGCTATT GGACGCTTTA
GGCAAGGGAG AGCTTGATCT TCTATTGTTA GCCTTGCCAG TGGATACCAG TGGATATCAC
AGTATGAAGG TAGGGATCGA TCCCTTTAAA CTGGTTGTTC ATAACGACCT AGCTGGTGAG
ATCCATGAAC CTTTGGATTA TCAATCTCTG CCCGATGAAA GTATATTTTT GCTTCAGGCT
GAGCATTGCA TCACTGGGCA TGCAGTCAGT GCTTGTCAGC TTGGTGACAG TGCTAAGGTG
AATCCATTTG CAGCAACGAG TTTACATACG TTAGTGCAGA TGGTTAACGG CAAGTTGGGA
ACGACATTTC TACCTCAAAT GGCGATAGAT GCAGGTATCC TCAACGACAC TGATTTAGAG
GTGATGCAGC CACCAGGTGA GGCACCCTAC CGAGATATCG GATTGGTGTG GAGGCAGACT
TCAAGCCGCA TCTTGACCTT TAGGACTTTA GGCTTAGCGA TACAGGAGCT CTTAGCTAAA
GAGCCTGTTT AA
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| Protein sequence | MKHLPSLKNL FYLVNLYQEQ NFNRAAKMCH VSQSTLSSGI QNLEEQLGHQ LIERDHKSFI
FTAIGEEVVL RSRKLLTDVD DLVELVKHQG EPMTGDIRLG CIPTIAPFLL SRVVKQCQQT
YPNLTMFLKE DTTERLLDAL GKGELDLLLL ALPVDTSGYH SMKVGIDPFK LVVHNDLAGE
IHEPLDYQSL PDESIFLLQA EHCITGHAVS ACQLGDSAKV NPFAATSLHT LVQMVNGKLG
TTFLPQMAID AGILNDTDLE VMQPPGEAPY RDIGLVWRQT SSRILTFRTL GLAIQELLAK
EPV
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