Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1208 |
Symbol | |
ID | 6115443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1539776 |
End bp | 1542325 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641632692 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_001759596 |
Protein GI | 170725570 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0757015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0025212 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTCCATC CCACCTTTGC AAGGTATGCT CTAATCGCAT GTTCAACACT GCTTATCTTC ACTCCTCCGC TATTCAGTAG TGAATACCAA CTTCCCTCAA AACCTCTGCA AGATGTGGTT AAGCAGACAA AAAAAGTCAG TACGCGTTTA TCCGACAATG GGCAATGGCT GGCAATTCTT ACTCCTAGAA CCCACCCATC GATTGAGCAT TTAGCACGGA AAGAGCTCAA ACTTGCTGGA CTCAGATTAT CCCCCAAACA GCTTATTCCT AGTCGAGTAA AGTTCAGCTA CCTCAACATA GAGCTCGTTA ATTTAAAGCA GGTAAACCTA AGTAAAACGG GGTCAGATAA CAGTGAGTTA AGCCAAGCAC CTATTCACAT TGAGATCCCA CAAGGAGTTG AGTTAACCAA TGTTCAATTT TCACCCGACA GTCGCTATCT AAGCTTTATC GGGCTTTCAG ATACAGGTGC CGATCTCTAC CTCTATGAGA TAGAAACCAA GCTCACCAGA GTCATAAACC CAAAACGACT TAACGCAACA CTTGGGCTTA ACTACCGCTG GCTAAATAGC AGTAAGGGAG TGATCACTAA CCTTGCGAGT AAAGCGCCGA ACATTAAAGC TAAGTCCACA AGTATCACCC CTAACATCAG CGAGACTTTA GGTAAAAAAG CCCCCAGAAG GACCTATCAA GATCTGCTTA AAAACCCCAG TGATGAGGCA AGGTTCAGCG CATTAACGAC TAGCCAACTA ACCCTCATTT CCCTTGATGG CAACACCACC AACATAGGCC AGCCAGGGAT AAATATCAGT TATCACCTAT CACCCGATGA CAACTACTTG CTGGTAAAAC GTATTGCACC ACCATTTTCC CATATGGTTA AGTATTATGA TTTCGCCCAA TCGGTAGAGA TTTTTCATAC ATCAGGTAAA AAGCTGTCAA CTTTGGCCTT ATTAGAGAGC AGTGAATACC GACCGCCAGG AAGCGATTCG GTTAGGAAAG GTCCACGCAT GATACATTGG CGCAGTGACA AACCCAGCAC CTTAGCCTTT GCCAAAGCTT TGGACAAAGG AGACAGCAGA GTCAAAGCTT CTCACAGAGA TCAACTACTG CAGCTCGATG CCCCTTTCAA CCTCGCCCCT AAACCTTTAG TTAACACTCC GTGGAGGATC AGCCAGGTAA AATGGGGAGA GCAAAACAGA GCGCTGATCA CTGAACGTCA TTCAGACAAG AAACAGATGA GAGTGAGCTT TCTCAATACA GAAGCGAGCA GTGAGCCTCA GCTAGTCCTT TGGTATCAAA AAGCCATACG CGATACCTAT AAAGACCCCG GAAAACTTTA TCGCACTCAA GCCTATAACA AGGGTAAACC TTTAGGTCGT GTATTTCATA CGGAAAATAA TACCTTACTT CACTATGGAC TCGGCGCATC TCCCCAAGGT TATCAGCCAT TCTTAAAGTC CCTCACCCTA AAAAACACAG ATGAGCAACC CGCTGGCTAT CTCTCTAATA CCCTATGGCG TTCATCAGAT AAGCAGCTTG AAACAGTAAG GTATGTGGTA GATCTTCAGC CCCTCACCTT AGTGCTAAAC CGACAATCCA ATGACACGCC TTCACATCTG GTTCTGCTCA ACGTCGAGTC CGGAAAAGAG AAAGTTTTAT ACCGTAACCC TCAGTCACTC AATGCGTTTA AAGGGATGAG CAGACAGCTT GTAAAGTACA AGCGTGAGGA TGGCGTACCA CTCTCTGGAG TGCTTTATCT ACCGTCAAAC TACAACAAAG AGGATGGTCC ATTACCTGTC TTAATGTGGG CCTACCCCCG CGAGTATAAG AATGCCGAAG TGGCGAGCCA GGTTAATTAC TCAGAAAATC AGTACACACA GATAAGTCCC AAGGGGCCAG TTCCATTTGT TGCTAACGGA TTTGCTGTGT TCGATCGTGT AGCCATGCCC ATCATAGGTG AAGGAAAAGA TAAGCCCAAT GACAGTTTCA GAACTCAACT GGTGAACAAT GCCCAAGCCG CTATCGACAC ACTCGTCACC ATGGGCGTTG CCGACAGAGA TAGAGTAGCT ATTGGTGGTC ACTCCTACGG CGCATTTATG GTCGCAAACC TATTAGCTCA CTCGGATCTA TTTGCCGCAG GCATCGCCAG AAGTGGCGCC TATAATCGCA GTTTAACTCC CTTCGGTTTT CAACATGAAA AACGAAACTA CTGGGAAGCA CCTAGCCTAT ATCAGCAGAT ATCTCCCTTT ACCCATGCCG ATAAAATTGA TGAACCCCTA CTACTTATGC ACGGAGAGAT GGATTCAAAT TCTGGCACCT ACCCGATGCA ATCCGCTCGT TTATTTAAAG CTATCCGTGG ACTTGGTGGA CAAGCAAGAT TGACCACCTT CCCCTATGAA AGCCACAGTT ATAAAGCAAA AGAGTCCATT CTCCATATGC TTTGGGAGCA GGAAAGCTGG CTTAAGCAGC ACCTACAGCA ACCAAAACTA ACTGGCGGAA GTGAGCGCTC AAATAATAAA GCCTTAACAC CTCAAGTGTC ACTCCACTGA
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Protein sequence | MFHPTFARYA LIACSTLLIF TPPLFSSEYQ LPSKPLQDVV KQTKKVSTRL SDNGQWLAIL TPRTHPSIEH LARKELKLAG LRLSPKQLIP SRVKFSYLNI ELVNLKQVNL SKTGSDNSEL SQAPIHIEIP QGVELTNVQF SPDSRYLSFI GLSDTGADLY LYEIETKLTR VINPKRLNAT LGLNYRWLNS SKGVITNLAS KAPNIKAKST SITPNISETL GKKAPRRTYQ DLLKNPSDEA RFSALTTSQL TLISLDGNTT NIGQPGINIS YHLSPDDNYL LVKRIAPPFS HMVKYYDFAQ SVEIFHTSGK KLSTLALLES SEYRPPGSDS VRKGPRMIHW RSDKPSTLAF AKALDKGDSR VKASHRDQLL QLDAPFNLAP KPLVNTPWRI SQVKWGEQNR ALITERHSDK KQMRVSFLNT EASSEPQLVL WYQKAIRDTY KDPGKLYRTQ AYNKGKPLGR VFHTENNTLL HYGLGASPQG YQPFLKSLTL KNTDEQPAGY LSNTLWRSSD KQLETVRYVV DLQPLTLVLN RQSNDTPSHL VLLNVESGKE KVLYRNPQSL NAFKGMSRQL VKYKREDGVP LSGVLYLPSN YNKEDGPLPV LMWAYPREYK NAEVASQVNY SENQYTQISP KGPVPFVANG FAVFDRVAMP IIGEGKDKPN DSFRTQLVNN AQAAIDTLVT MGVADRDRVA IGGHSYGAFM VANLLAHSDL FAAGIARSGA YNRSLTPFGF QHEKRNYWEA PSLYQQISPF THADKIDEPL LLMHGEMDSN SGTYPMQSAR LFKAIRGLGG QARLTTFPYE SHSYKAKESI LHMLWEQESW LKQHLQQPKL TGGSERSNNK ALTPQVSLH
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