Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1148 |
Symbol | |
ID | 6115382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1477470 |
End bp | 1478756 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641632631 |
Product | glucose/galactose transporter |
Protein accession | YP_001759536 |
Protein GI | 170725510 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0931456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.671302 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGTA CATCAGTATT AAATGAGCAA TCACAGAGTG CGCACCAAAG TGGGGACTTT CGCTTTGCTT TAGTGGCGCT AACCTCACTC TTTTTTATGT GGGGTTTTAT CACTTGTCTC AATGATATTC TTATCCCTTA CCTGAAAAAC ATGTTTGATC TTAACTACAC CCAAGCGATG TTGGTTCAGT TCTGCTTTTT CGGGGCTTAC TTTATCGTCT CTATTCCTGC GGGAAGTTTA GTGGGAAAAA TTGGCTATCA GAAGGGGATT GTCACTGGAC TTGCCATTGC ATGTTTGGGG TGCTTACTCT TCTATCCATC GGCAAGTTTC GCCTCCTACT GGATGTTTCT TGTGGCTTTT TTTGTGTTGG CTTCGGGCAT CACTATACTG CAAGTTGCCG CTAATCCTTA CGTGAGTGTA CTTGGCCCTG CCAACACTGC TTCGTCTCGA TTGACTCTGA CTCAGGCTTT TAATTCATTG GGGACGACAG TTGCGCCATT TTTTGGTAGC TGGTTAATTT TATCGACCTC AGAGCATGGG GGCACAAACT CTGAAGTATT GAATGATGCC GCTTACCAGG CAAGTACGGT ACAGGTGCCG TATCTGATCT TAGCGGGTAC ATTAATCTTG ATAGCGGCAC TCTTTTTACG TTTAAAATTG CCACTTTTGG GGATGAAGAA AAGCTCATCA TTGCCTGAAA AGCCAGGTGT TCATAGTATC AGTGCTTGGC ATTATCCTCA TTTAGTTCTT GGCGCCGTGG GCATTTTTGT CTATGTGGGA GCTGAGGTGT CAATCGGTAG TTTTCTGATC AGCTTTTTAG GTCAGGAGGA GATTGCCGGG CTTAGCCATG CAGAAGCTGC AAACTATATT GCTTACTATT TTGGTGGCGC TATGGTGGGA CGCTTTTTGG GTGCGGCGGT CATGCAGAAG ATTAAAGCTG GTAAGGTGCT GGCATTCAAT GCGGTATTAG CCTGTGTGTT GATTGTGTTT GCAATCTTTA GCACTGGGAG TCTTGCCATG TGGGCACTGC TTCTCGTGGG TTTGTGTAAC TCAATCATGT TTCCTACAAT TTTTAGTTTA GCGCTGCAAG ATCTTGGGCA ATTCACCAGT CAGGGATCGG GTATCTTATG TTTAGCGATA GTCGGTGGTG CCATTATTCC TCTGCTTCAA GGAGGCTTAG CTGATATTTT TGGTATTCAA TTAGCTTTTG CTTTACCACT GCTTTGCTAC GGGTTTATTG CTTATTACGG CATGAAAGGC TGTGATGCAA AACGGCCATT ACACTAG
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Protein sequence | MASTSVLNEQ SQSAHQSGDF RFALVALTSL FFMWGFITCL NDILIPYLKN MFDLNYTQAM LVQFCFFGAY FIVSIPAGSL VGKIGYQKGI VTGLAIACLG CLLFYPSASF ASYWMFLVAF FVLASGITIL QVAANPYVSV LGPANTASSR LTLTQAFNSL GTTVAPFFGS WLILSTSEHG GTNSEVLNDA AYQASTVQVP YLILAGTLIL IAALFLRLKL PLLGMKKSSS LPEKPGVHSI SAWHYPHLVL GAVGIFVYVG AEVSIGSFLI SFLGQEEIAG LSHAEAANYI AYYFGGAMVG RFLGAAVMQK IKAGKVLAFN AVLACVLIVF AIFSTGSLAM WALLLVGLCN SIMFPTIFSL ALQDLGQFTS QGSGILCLAI VGGAIIPLLQ GGLADIFGIQ LAFALPLLCY GFIAYYGMKG CDAKRPLH
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