Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1101 |
Symbol | |
ID | 6115335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1421949 |
End bp | 1423646 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641632584 |
Product | chitinase |
Protein accession | YP_001759489 |
Protein GI | 170725463 |
COG category | [R] General function prediction only |
COG ID | [COG3979] Uncharacterized protein contain chitin-binding domain type 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACATT ACCTATCCTT AGCTATTTTA ACCACTTTGA GTCCTATAAC GCTTTTTGCC GCAGAGCCTG TGCATTTTAC TCTGGCAGAG GTTGATGCCA AAGAGTCTGC TTTGACCGAC TTTCCCTTGA TGAGAGCGGT GAAGTCATCT ATCGCGACCA GAGACAATGC TATTGTCGAC GCCATTATCC CCTTGAGCCC TAACAATCCG GATAATGTTA AGCGCCTAGA GTCTGTGTTG AGTGAAACAC AGTTTGAGTT TCTTTTTCCT GTTCGCGCTG CTGAATATAC CTATCAAGGT TTGTTGCAAG CCGCGGCTAA GTTTCCCGCT TTATGTGGTT CATACATAGA TAATCGTGAT GCCGATGCTA TCTGCCGTAA ATCCCTAGCT ACCATGTTTG CCCATTTTGC ACAGGAAACC GGTGCCCATG ATAAGTGGAT GACTGAGCCA CAATGGCGAC AGGGCCTTTA TTGGGTGCGT GAAGTGGGTT GGGATGAAAC CAAGCGCGGT GGTTACAATA TGGAGTGCAG CCCTGACACT TGGCAAGGGC AGGTTTGGCC TTGCGGCACC TTTGCTGATG GCAGTTATAA GAGCTATTTT GGACGCGGCG CTAAGCAGCT CTCCTACAAC TATAACTATG GGCCTTTCTC TGATGCCATG TTTGGTGATG TCAGTACTTT GCTCAATAAC CCTGAAATGG TGGCCGATAC CTGGCTGAAC CTAGCCAGTG CAGTGTTTTT CTTTACTTAC CCCCAACCAC CTAAACCTTC AATGTTGCAT GTTATCGATG GAACGTGGCA GCCCAATGCA CGAGATACAC AAAATGGACT CTCAGCTGGA TTTGGCGCAA CCACCCATAT TATTAATGGT GGCATTGAGT GTGGTTCAGG CAGTGAGAAG CCGCAATCGC TGAATCGGAT TGAGTATTAT CAAGCACATG CGCAATATCT TGGCGTTCCA GTGGAAGCCA GTGAGGTGCT AGGTTGCAAG GATATGAAGC CTTTTGATAA CCAAGGGGCA GGTGCCATGT TGATCTATTG GGAGCAAGAT TGGTCATATA TTGCAGGAAA TCCCAATGGT GGCAAAAGCT ATGCCTGTAA GTTGGTGGGG TATCAGACTC GTTATAGTGC TTTTAAGCCC GGTGATTATC AGGGCTGTTT GATGCACTTT TTCCCAGAGG TTGTCATCGA TGATTCTGGT ACGCCAACGG ATCCCACAGA TCCGGTTAAT CAAGCGCCAA CAGCTAATAT TCAGGGAGTG AGTGAAGCAG AAAGTGGAGC GGTTATCACT CTGTCAGCGT CCCAGTCTAG CGATCCTGAA GGTGGAGTGC TCAATTACCG CTGGAGCTTA CCTATTGGTG CAAGTGCCCC CTCTGTTGAG CAAGCATCAT TGTTATTAAC TTTACCAAGC CCTAGCAGCA CAGAAACCAT ATCAGTCTCT CTTGAGGTGA CCGACGATGC GGGGCTAAGC GCGTCGATTA ACCATAATGT GCTGGTTACA GTCAGTGGCG GTACGCCCCC TGATGGGGAA GTGCCTTATC AAGCTGGTTA TGCTTATGTG GCGGGAGAGC GAGTTTCTCA TGCTGGTGGA GTTTATGAAT GTAAACCATA TCCCTATACA GCTTGGTGCG CTGGCGCATC ATGGGCATAT GAACCCGGAG TAGGCGTTGC ATGGCAAGAT GCTTGGATAG CGAGATAG
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Protein sequence | MKHYLSLAIL TTLSPITLFA AEPVHFTLAE VDAKESALTD FPLMRAVKSS IATRDNAIVD AIIPLSPNNP DNVKRLESVL SETQFEFLFP VRAAEYTYQG LLQAAAKFPA LCGSYIDNRD ADAICRKSLA TMFAHFAQET GAHDKWMTEP QWRQGLYWVR EVGWDETKRG GYNMECSPDT WQGQVWPCGT FADGSYKSYF GRGAKQLSYN YNYGPFSDAM FGDVSTLLNN PEMVADTWLN LASAVFFFTY PQPPKPSMLH VIDGTWQPNA RDTQNGLSAG FGATTHIING GIECGSGSEK PQSLNRIEYY QAHAQYLGVP VEASEVLGCK DMKPFDNQGA GAMLIYWEQD WSYIAGNPNG GKSYACKLVG YQTRYSAFKP GDYQGCLMHF FPEVVIDDSG TPTDPTDPVN QAPTANIQGV SEAESGAVIT LSASQSSDPE GGVLNYRWSL PIGASAPSVE QASLLLTLPS PSSTETISVS LEVTDDAGLS ASINHNVLVT VSGGTPPDGE VPYQAGYAYV AGERVSHAGG VYECKPYPYT AWCAGASWAY EPGVGVAWQD AWIAR
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