| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1100 |
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| Symbol | |
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| ID | 6115334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1419210 |
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| End bp | 1421801 |
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| Gene Length | 2592 bp |
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| Protein Length | 863 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641632583 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001759488 |
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| Protein GI | 170725462 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.167101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.565849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAACA CTAAACTCTC ATCGGCTGCG CTTGTCGTAG CGAGTGTATT TGCCTCGTCG
GCATATGCAT CAGTACCCGG TAAACCAACG ATCGGCTGGG GCGAAACTAA CTTTTCTATT
ATTGAGGTCA ATCAAGCAGC TACCGCTTAC AATCAACTTG TTACCGTTAA AGATGCCGCA
GAAGTATCGG TTAACTGGAA CTTGTGGTCA GGGGAGCTGG GCGATACGGC TAAGGTTTTA
TTTGATGGGG TAGAGGTCTG GTCGGGCAGC TCTACTGCAT CAGGTTCTGC CACATTCAAT
ATCAGTCAAG GTGGTCGCTA CCAGATGCAG ATTGAGCTCT GTAATGCACA GGGTTGTACA
CTCAGTGATG CTAAAGAGAT CATTGTTGCC GATACCGATG GGAGTCATCT TTTACCCCTT
GATACTCAAC TGGGGGAGAA CAATAGACCT TATGTAAACA AGTCTGGCAA AGTGGTCGGC
AGTTACTTTG TTGAGTGGGG TGTATATGGC CGTAAATTCC CTGTAGACAA GATGCCAGCG
CAAAACCTAA CGCATATTTT GTATGGCTTC ACCCCTATCT GTGGCGGTGA TGGCATCAAC
GACAGTTTGA AAGAGATTGA GAGGAGCTTC CAAGCGCTAC AACGAGCCTG TAGTGGCCGT
GAAGATTTCA AAGTGGCGAT TCACGACCCA TGGGCAGCAG TTCAGATGCC ACAAGCAGGT
GTCAGTGAAT ATGCCGACCC ATACAAGGGT AACTTTGGCC AGTTGATGGC GTTAAAACAA
GCACAACCAG ATCTTAAAAT CTTACCTTCA GTAGGTGGCT GGACTCTGTC AGATCCTTTC
TATTTCCTTG GTGATAAAGT TAAACGTGAC CGTTTTGTCG CTTCGGTTAA AGAGTTTTTG
CAGACCTGGA AGTTCTTCGA TGGTGTCGAT ATTGATTGGG AATTTCCTGG TGGTAATGGC
GCAAATCCGA ATTTAGGCGA TCCTGTCAAT GACGGTGAAA CCTATGTGCT CTTGATGAAA
GAGCTAAGAG CCATGCTTGA TGAGTTGAGT GCCGAAACAG GTAGAACCTA TGAGCTTACC
TCTGCAATCA GTGCTGGCGC AGAAAAGATA GCTATGGTCG ATTATCAGGC CGCTCAGCAA
TATATGGATA ACATCTTCCT GATGAGCTAC GACTTCTACG GCGGCTGGTC CAATACCGAT
CTAAACCATC AGACAGCCCT ATATGCGGCT AGTTGGAAAC CAGATACTAA GAATACCACT
CATATCGGTG TTAATGCACT GCTTGCTCAA GGTGTGACTC CTGAGAAGAT TGTCGTTGGC
GCAGCTATGT ATGGCCGCGG CTGGACAGGT GTGAACGGCT ACCAAGATGG CAATCCATTT
ACTGGCACTG CGACGGGTAA AGTGAAAGGG ACTTGGGAAG ATGGAGTGGT TGATTATCGT
CAGATAGTCA ACGAGTACAT GTCTGGTGAG TGGCAATATG AGTATGATGA GGTTGCTGAA
GCGCCTTACG TCTTTAAGGC TTCGACTGGC GATCTGATCA CTTTTGATGA TGCTCGCTCC
GTTAAAGCTA AGGGACAATA TGTTACTGCA AACCAGTTAG GCGGGTTGTT CTCATGGGAG
ATTGATGCAG ATAATGGCGA TATTCTCAAT GCTATGCATG AAGGTTTAGG TCATGGTGAG
GGAACCAATC CACCTGCAAA TAAAGCGCCG ATTGCTAATG CAGGCAGCTC GCAAAGTGTA
ACTGGCCCTA GCGATGTTAT CCTTGATGGC AGTCTGTCAC GAGATCCTGA AGCTAAGGCA
TTAACCTATG TCTGGTCGCA AACCTCCGGG CCTGCAGTGA GCTTAGTTAA TGCTGATATG
GCCCAAGCCA GCATTAGCCT TAATGCGACA GATGCAGATG TTGTCTATGG GTTCTCGCTA
ACGGTGACCG ACCCTGAAGG TTTATCGGCT ACTGCGGCAA CGACTGTTAC CAATATGGCA
CCGCAAGCTA ACCGTGCACC AGAGGTGTCA CTCGATGCCA ATGTTGTGGT TGATTCTGCT
CAACAGGTGA GCATAGTTGC AAGTGGCAGT GATGCTGATG GTGATGCGCT TACTTATAGC
TGGACAGTGC CTGCTGGCTT AACTGCTACT GGGCAATCTA GTGATACACT AGTTGTGACT
GCGCCTGCTG TGATAGAAGA TACCACTTAT ACATTAAGTG TACTGGTATC CGATGGCTCT
CTTGACGCGT CGGCTCAAAC GGTATTAACC GTGAAAGCGC CAACCAGTGG CGGTTGTGAA
ACAAGCGATC CTGATGCGGT TAATCACCCA GCTTGGGATA GCACACTTGT TTATAACGGC
GGTGATACAG TGAGTCATAA CTGTTTAGTC TGGAAGGCTA AATATTGGAC TCAAGGTAAT
GAGCCGACAG TGACAGCTGA TCAGTGGACA CTTCAAAGTA GTGTTGAGAT GGGCTGGAAT
GCGGGAGTCG CCTATAACGG TGGCGAACAG ACAACCCATA ATGGACATAC TTGGCAAGCC
AAGTGGTGGA CAAAAGGTGA AGAGCCTGGT GTTGCCTCTG TGTGGAATGA TTTAGGGGCG
ACAGCCAACT AA
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| Protein sequence | MFNTKLSSAA LVVASVFASS AYASVPGKPT IGWGETNFSI IEVNQAATAY NQLVTVKDAA
EVSVNWNLWS GELGDTAKVL FDGVEVWSGS STASGSATFN ISQGGRYQMQ IELCNAQGCT
LSDAKEIIVA DTDGSHLLPL DTQLGENNRP YVNKSGKVVG SYFVEWGVYG RKFPVDKMPA
QNLTHILYGF TPICGGDGIN DSLKEIERSF QALQRACSGR EDFKVAIHDP WAAVQMPQAG
VSEYADPYKG NFGQLMALKQ AQPDLKILPS VGGWTLSDPF YFLGDKVKRD RFVASVKEFL
QTWKFFDGVD IDWEFPGGNG ANPNLGDPVN DGETYVLLMK ELRAMLDELS AETGRTYELT
SAISAGAEKI AMVDYQAAQQ YMDNIFLMSY DFYGGWSNTD LNHQTALYAA SWKPDTKNTT
HIGVNALLAQ GVTPEKIVVG AAMYGRGWTG VNGYQDGNPF TGTATGKVKG TWEDGVVDYR
QIVNEYMSGE WQYEYDEVAE APYVFKASTG DLITFDDARS VKAKGQYVTA NQLGGLFSWE
IDADNGDILN AMHEGLGHGE GTNPPANKAP IANAGSSQSV TGPSDVILDG SLSRDPEAKA
LTYVWSQTSG PAVSLVNADM AQASISLNAT DADVVYGFSL TVTDPEGLSA TAATTVTNMA
PQANRAPEVS LDANVVVDSA QQVSIVASGS DADGDALTYS WTVPAGLTAT GQSSDTLVVT
APAVIEDTTY TLSVLVSDGS LDASAQTVLT VKAPTSGGCE TSDPDAVNHP AWDSTLVYNG
GDTVSHNCLV WKAKYWTQGN EPTVTADQWT LQSSVEMGWN AGVAYNGGEQ TTHNGHTWQA
KWWTKGEEPG VASVWNDLGA TAN
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