| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1049 |
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| Symbol | |
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| ID | 6115283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1360610 |
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| End bp | 1361320 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641632532 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001759437 |
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| Protein GI | 170725411 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAA AACGTGCCCG TTTAGATAGG TTTATTAGTC AACACCTTAA GATTAACCGT
AAAAATGTCC GTTTAATGTT GGCTAAAGGT CAAGTGAGAG TGGATGGGGA ACTTGCTCGT
GATATCGATC TAATCGTGGA TGAATTTTCC CATATCTGTG TCAATGATGA AGTGATTCAA
GCTAAGCAAG CTAGCTATAT TATGCTGCAT AAACCTGTTG GTGTTGTGAG TGCGACTGTC
GATGATAAAC ACAAGACAGT GATAGAACTT CTAAAGTGCG ATGATAGGAA TAGTCTGCAT
ATTGTTGGGA GGTTAGATCT TAATACTTCA GGTTTGTTGC TGTTAACCAA TGATGGCCGC
TGGTCGAAGC AGTTGATGGA TCCAGAGTAT AAAGTTGGAA AGCTATATCG TGTAGAGCTG
CAAAACCCAC TGACTGTTGA GTATATTTCA GCTTTTGCGA AGGGGATGTA TTTTGAGTTT
GAAGATATAA CAACCTTGCC AGCTGAACTT GAAATAGTCG ATAGCCACAC AGCTCTAGTG
ACACTGTACG AGGGGCGTTA TCATCAGATT AAGCGGATGT TTGGCCGTTT TCGTAATCCC
GTTGTTGGTC TGCATAGAAT ATCTGTTGGT CAGATAGTGT TGGATAAAAC GCTGGCATCG
GGCCAAAGTC GACCTCTGAC TCCTGAGGAA ATTAAGCATA AACTAACATA A
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| Protein sequence | MESKRARLDR FISQHLKINR KNVRLMLAKG QVRVDGELAR DIDLIVDEFS HICVNDEVIQ
AKQASYIMLH KPVGVVSATV DDKHKTVIEL LKCDDRNSLH IVGRLDLNTS GLLLLTNDGR
WSKQLMDPEY KVGKLYRVEL QNPLTVEYIS AFAKGMYFEF EDITTLPAEL EIVDSHTALV
TLYEGRYHQI KRMFGRFRNP VVGLHRISVG QIVLDKTLAS GQSRPLTPEE IKHKLT
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