| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1040 |
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| Symbol | |
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| ID | 6115274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1352784 |
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| End bp | 1355243 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641632523 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001759428 |
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| Protein GI | 170725402 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATC AAAATAAAAA ACAGTCAACA AATGTTACGT TCGCAGAGAG TAAGCTGCAT
CGCTTATCTC ATGCGATTTG TGGAGCAGAT ATTGGCATTT GGGAGTTTAC GCCACACACG
CAGGAGTGCT ACTTCTCACC TAAGCTAAAA AAGTTAATTG GTCTACCTAT TGATCACCCT
CTCACCTTAA ATGAGTTGAG AGAAAGAACG AGTCACACTT ATCAGCATCA CTTTAATATC
TTTGATTCAG AGAATCTCAC ATTAGGTACT CAATGTAATT TCGATTTTAA GATTAAGATT
GCGGAGACTG AACGCTGGTT TGAGTTAAGG AGTGAGGTTT TCCTCAATGA AGAGAATCAA
TGCACGATAA CAGGCTCCTT AACTGACAGA ACTCAAGAAA AAGAAGCGCT TACAGCTTTA
AATCTTGCCA TTGAAGCAAG AGATAATGCT CTAGATGCAG GAGATATTGG AAACTGGCAA
GCCGAGCTAA ACAGTGAGAA TGAATGGATT TGGAGTTGGG ACAACCGAGC TAATAAGATG
TTTGCTCTAC AGCCAGAAGA TATCGGCAAT ATAGATAGAT GGGTCCAGCA TCTTCATCCA
GACGATAAAG AGCCCGCAAT TGACGCGATA CAACACTGTT TAGTAACAGG TGAGATCTAT
AATGAACAAT ATAGATCTGT ACTCCCTGAT GGAGAGGTTA TTTACGTACA TGCTAGAGCT
AAGATAGGAA GAGATGATCA AAATAGAATA TGTCGTATCG ATGGAGTCTG CGTCAACCAG
ACACCATTCT TTAATATTCA AGCCAAACTA CAAGAAGCCA ATGACCAAGC AGAAGCTAGG
GTAAAAGCCC GAACTTTAGA GCTACAACAA GCTAAAGAGA GAGCCGAGCA AGCGAATCAA
ACAAAGAGTA GCTTTCTCTC GATGATGAGC CATGAATTAA GAACCCCTAT GAATGCGGTA
TTGGGCTCTT TAGATCTACT TTCACTATCA AAGCAGACTC CTGAGTCAAG AGATCTTATC
GAAACGGCAA CCACTTCGGC AAAAAACCTC ATATTTATCT TAAATGATAT CTTAGATATC
AACAAGATAG AAGCAGGGAA GATGCAGTTA GAGCAGCGAG ATTTCTCTAT TACTGAGGTA
ATAGATAATG TGGTCCAAAT ATATTATCCC CTAGCAAACG GTAAGAGAAT AAAGCTAGAT
GTCACAGAGG ATCCCACAAT ACCTAAGTAT CTAGAGGGCG ATGCAGTGAA GGTACGCCAG
ATAATCTTTA ACCTATTAGG AAACGCATTA AAGTTCACCT CCACTACAAC TGAAAAACAG
GGAGAAGTAC AGCTAAACAT TAATATTGTT GAGCACAATA GCATTATCTA TAAAGTTGCA
TTTTCAATCG TAGATAATGG TATCGGCATA GAAAAAGAGA CACAAAAAAA ATTATTTACC
CCCTTCATTC AGGCTCAACG TTCAACGACA CGAGAATATG GGGGGACAGG CTTAGGTTTA
GCCATCTGTG GAAACCTAGC ACAACTGATG GGAGGGGAGA TAGCACTAAC AAGTTGCCCT
AATGAAGGCT CTACTTTCAA AGTAGAACTG CCATTCTGGC GTTCTAAGCA GCATACCGAT
GAGCCAATAT ACCAATTGGA AGGCACCAAA ATTGCACTTT TAAATATAGA TGAGACTCAC
AATACTCAAG AGTTAATCAT ACAGCACCTA GAAAGCGAAG GAGCACGTAT AGAGGTACTA
GAATCTGAAA AGCAGCTGTC TTCGGCCAAA GAGTATGACA CTCTCCTCAT CCTTGTCAGC
TCCCATCAGC ACTTTGCGCA GCTCAAAAAC ATTCAACATA AGCTTTCAGA TAGTAGTCAC
CTGCTAGTTG CCACTTGTAG AGATGAAATC AGCACATTGC GCCAAATACT TCCTCAGACA
GCAATACTGC CACTTCACCC GATGACTCGA CTACAACTTA TTAACTCAAT ACATAGATCC
ATGGACAATG AACTATGCTT AGACTTAGAT GACTTAGATG ACTTAGATGA CTTAGATCTT
GAGCAGCTCT CAATTGAGGA AGTAACTCAA CCCCTACCCG ATAAAGCAGG GATCTTAGTG
GTTGAAGACA ACCCCCTCAA TCAGAAATTG ATCCTTAAGC AGCTTTCGAC CTTAGGGTAT
AGCTGTGACC TGGCTCATGA TGGACTCGAT GGCATAGAAC ATTGGAAGAG TGCCGATTAC
AAACTAGTCT TAACAGACTG TCATATGCCA AACCTTGATG GTTATGACAT GACAAAAAAA
ATCAGAGAAC TAGAGGAAGA AAGTGGAAAA CAAGCAACAC CCATAGTGGC AGTCACAGGT
GCTGCAATGA CTGGAGACGC AGAGCACTGC TTATCAACGG GTATGAACGA CTTCGTCAGT
AAACCATTAA TTTTAGAAGA CTTAAAGAAA GTTGTTGAAA AGTGGTATGT GAATGATTGA
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| Protein sequence | MDNQNKKQST NVTFAESKLH RLSHAICGAD IGIWEFTPHT QECYFSPKLK KLIGLPIDHP
LTLNELRERT SHTYQHHFNI FDSENLTLGT QCNFDFKIKI AETERWFELR SEVFLNEENQ
CTITGSLTDR TQEKEALTAL NLAIEARDNA LDAGDIGNWQ AELNSENEWI WSWDNRANKM
FALQPEDIGN IDRWVQHLHP DDKEPAIDAI QHCLVTGEIY NEQYRSVLPD GEVIYVHARA
KIGRDDQNRI CRIDGVCVNQ TPFFNIQAKL QEANDQAEAR VKARTLELQQ AKERAEQANQ
TKSSFLSMMS HELRTPMNAV LGSLDLLSLS KQTPESRDLI ETATTSAKNL IFILNDILDI
NKIEAGKMQL EQRDFSITEV IDNVVQIYYP LANGKRIKLD VTEDPTIPKY LEGDAVKVRQ
IIFNLLGNAL KFTSTTTEKQ GEVQLNINIV EHNSIIYKVA FSIVDNGIGI EKETQKKLFT
PFIQAQRSTT REYGGTGLGL AICGNLAQLM GGEIALTSCP NEGSTFKVEL PFWRSKQHTD
EPIYQLEGTK IALLNIDETH NTQELIIQHL ESEGARIEVL ESEKQLSSAK EYDTLLILVS
SHQHFAQLKN IQHKLSDSSH LLVATCRDEI STLRQILPQT AILPLHPMTR LQLINSIHRS
MDNELCLDLD DLDDLDDLDL EQLSIEEVTQ PLPDKAGILV VEDNPLNQKL ILKQLSTLGY
SCDLAHDGLD GIEHWKSADY KLVLTDCHMP NLDGYDMTKK IRELEEESGK QATPIVAVTG
AAMTGDAEHC LSTGMNDFVS KPLILEDLKK VVEKWYVND
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