Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0967 |
Symbol | |
ID | 6115201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1278917 |
End bp | 1279876 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641632450 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_001759355 |
Protein GI | 170725329 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000101779 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA TCTTTTTGGT TATTTTTTAC ACTTTGCTTC TATCTGCTTG CCAACCACAA GCACTGGATA CTCAAGAGTT AATCTTCGAG CCTAGCTATG ATGCCAGCCT ATCCTCACAA GGGGATCTCG CGCTAGTCAG TACCGCTAAT AACGGGCTAC AACTTTGGGA TCTTCACAAG CAAACACAAC TATTTACCTG GCGGCACGGT GAAGCTGGCG CCAGTGTTTT CGATACTGCT ATCTCAGAAA ATCAAGCCTA TGCAGCTTCA CTCAGCCGTG ACTCTGTCGG CCTATGGCGT ATCTCTGATG GCCACTCTCT GGGTTGGTGG TCACTCCCCT CTAGCGGTCA AAGTGTCGAT GTAGCCAACA ATGGGGCGCT ACTTATCGGC TTAAATGATG GCAGCGTGAT GTCTCTTAGA CCCAATAGCC GCACACTGAT TAAATTTCTA GGACACAGCG AGAAGGTCAA TAGCGTCTCC CTCTCCTCCG ATGGGGGGTT GGCACTAACA GGCTCTAACG ATAAGCACGC CATCCTCTGG AACCCATCAA GTGGACAACC AATACAGGAT TGGCAACTGG ATAACCGGGT GATAAAGGTT AAATTAAATG CCAGTGGCAA CTATGCCTTT ATCGGTGATA GCACTAAGGT TGCTCAAATT ATGGATAACG CAACCGGTGA GGTGATAAGC CAATTAAATA TCCACCGAAG GAAGATGAAC TTCTCGGCGG CGCGCTTCTC CAGCGATGAT AGGCAGCTAA TTACAGGCAC TCCTGCAAGA GAGTTGATAG TGTGGCAGGT TAAAACAGGG GAAAAACTGG CTAAATGGCA AGTTCAGCGA ACCAAACATG CCCAAATTAA GGGAGCCGTT GTATACTCTG TCGCAAACAA AGATCCAGAT AGGATCATTA GTATCAGTAG TAACGGCCTT GTGGAAACTT GGCCAGTACC TGTCCATTAG
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Protein sequence | MKKIFLVIFY TLLLSACQPQ ALDTQELIFE PSYDASLSSQ GDLALVSTAN NGLQLWDLHK QTQLFTWRHG EAGASVFDTA ISENQAYAAS LSRDSVGLWR ISDGHSLGWW SLPSSGQSVD VANNGALLIG LNDGSVMSLR PNSRTLIKFL GHSEKVNSVS LSSDGGLALT GSNDKHAILW NPSSGQPIQD WQLDNRVIKV KLNASGNYAF IGDSTKVAQI MDNATGEVIS QLNIHRRKMN FSAARFSSDD RQLITGTPAR ELIVWQVKTG EKLAKWQVQR TKHAQIKGAV VYSVANKDPD RIISISSNGL VETWPVPVH
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