Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0958 |
Symbol | |
ID | 6115192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1269415 |
End bp | 1269837 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641632441 |
Product | CBS domain-containing protein |
Protein accession | YP_001759346 |
Protein GI | 170725320 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3448] CBS-domain-containing membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTCA GGGATATAAT GAGTACTCAA CTGGTTTGTA TCAGCGATGA AGCCAATTTA AAAGATGCAC ACAGCCTAAT GCAAAACCGC GGTGTACGAC ATCTACCAGT GATCTCAGAA TCTGATGGCA AACTTGTAGG CATACTGACT CACAAGAAGA TGATAAGCAC TGTAATGTCT ATGATCTACA AATATGGCGC CGATGCGCTA GATAGAAAAG AGCGAAATCA AGGGATCCAG CCCTTGATGG AATCTGACTT TCAACGGTTA GCTCAAGATG AGCCTCTTGC CATCGTAGTT GAATATTTTA TCGATAATAA ACTAGGTTGC CTGCCCGTTG TCGACTCTGA AGGTAAGATT GAGGGGATTG TGACATCCTC AGATTTTGTG AAACTCTGTG CAGAGCTACT CAAAAGCCAA TAA
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Protein sequence | MNVRDIMSTQ LVCISDEANL KDAHSLMQNR GVRHLPVISE SDGKLVGILT HKKMISTVMS MIYKYGADAL DRKERNQGIQ PLMESDFQRL AQDEPLAIVV EYFIDNKLGC LPVVDSEGKI EGIVTSSDFV KLCAELLKSQ
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