Gene Swoo_0856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0856 
Symbol 
ID6115090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1148574 
End bp1149617 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content42% 
IMG OID641632340 
Producthypothetical protein 
Protein accessionYP_001759245 
Protein GI170725219 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTAG CTCGCCGGAC ATTGATTGAT GCAGAAACAA CGCCTTTCTA CCACGTAATT 
AATCGTTGTG TGAGAAGGGC TTACCTCTGC GGTAGTGATG AGCTGACAGG TAAGAGTTTT
GAACATCGAC GTGGCTGGAT TGTCGATAAA ATCAAGGTTC TTTCTTCCAT ATTTTGTATT
GATGTTTGTG CTTATGCGGT GATGAGTAAC CACTATCATC TAGTGTTAAA AATTGACTTG
AATGAAGTTA ATGCATTAAG TCATCGAGAT GTAATTAGTC GCTGGCAGCA GTTGTTTCAT
GGTCATGAGG TTGCCACTAA ATACATGAAA GGTGAGGAAC TCATTGAGGG AGAGCAGATA
CTACTTGATG GACTGATTGC TGAGTGGCAG GAACGTTTAG CTAGTATTAG TTGGTTTATG
CGTTGCCTTA ATGAGGAGGT TGCACGAAAG GCCAATCGCG AAGATGAGTG TAAAGGTGCT
TTCTGGGAGG GACGTTTTAA GTCACAAGCA TTACTTGATG AGCAAGCACT TCTTGCATGT
ATGATGTATG TGGACTTAAA CCCCATTAGA GCAGGGATTG CAGACTCGCT ACAATCTTCC
GATTTCACCT CAATTCAAGA GCGCATTTCT GAGCTAAATA CAGCTGAGAA TACTCAAGAA
AAAGTACTAA AAATAGTAGA TAAGAAAACA GTGTTCAAGA CTGTTACGCC GTTAAAGCCC
CTTGCTGAAT TTGATGGAGC TACTCACCAG GTAACTCAAC TAGGCATCCC ATTTCACTTC
TCTGATTACC TACAACTCAT TGATTGGACT GGCAGAGCGA TTAGGTATGA TAAGAAAGGT
TCTATTGATT CAAGCCGCCC TAAGTTACTT AGTGAATTAG GCATTTCATC AGCTGCCTGG
TTAACCTCAA CACGAGAGTT TCGTCGTCAA TACAGCGGAG TTAGTGGCCG TTGGGATGCA
ATGTGTAAAT TTAAAAAGAA ACATCAGAGT GGGAAATGGT GCAAAGGCAA AGCTTCTAGC
CAAGCACTTC ATCCATCACC ATAA
 
Protein sequence
MTLARRTLID AETTPFYHVI NRCVRRAYLC GSDELTGKSF EHRRGWIVDK IKVLSSIFCI 
DVCAYAVMSN HYHLVLKIDL NEVNALSHRD VISRWQQLFH GHEVATKYMK GEELIEGEQI
LLDGLIAEWQ ERLASISWFM RCLNEEVARK ANREDECKGA FWEGRFKSQA LLDEQALLAC
MMYVDLNPIR AGIADSLQSS DFTSIQERIS ELNTAENTQE KVLKIVDKKT VFKTVTPLKP
LAEFDGATHQ VTQLGIPFHF SDYLQLIDWT GRAIRYDKKG SIDSSRPKLL SELGISSAAW
LTSTREFRRQ YSGVSGRWDA MCKFKKKHQS GKWCKGKASS QALHPSP