Gene Swoo_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0517 
Symbol 
ID6114751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp733428 
End bp733964 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content45% 
IMG OID641632004 
Producthypothetical protein 
Protein accessionYP_001758909 
Protein GI170724883 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.13815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATA ACGTCAAGGC ATTACTTGCC ACCACAGCCC TCTTCTTTAG CTGCCAAACA 
TTGGCCAGCA GTGGCTGTGC ATTCGAAGAT CAGCAAGATG GCATGATCGC CACATGTAGC
GAGGAGAAAC AGGAAGTGAT TTTAACTGGA TTAGTAGAAG CGCAAACCAT GGTGACTGAG
TTAGCGGATT TCACCCAAGG CTACAAGGAA TACCAAGTAG ATACAGCTGC AATCACGCCG
CTAAAAAACC TAAAGGAACC TACTGAAATA GTGGTTATCA TAGGAACTTG GTGTCCTGAT
TGTCACCGTG AAACACCACG CCTTATCCGT ATCATGGAAG AGATAAACAA CCCGAATATT
AAGGTCACTT ATATCGGTGT CGACAGAGCA AAATCTGATC CACAAGGGCT AGCCGCCCAG
TATGAGTTTA CCCGCATTCC AACGATTATT GTTAGCCAAC AAGGTGAAGA GCTAGGCCGT
ATTATCGAAC GACCAGAAAC CTCACTTGAG ATAGACTTAG CTAAGATATT GAACTAA
 
Protein sequence
MNNNVKALLA TTALFFSCQT LASSGCAFED QQDGMIATCS EEKQEVILTG LVEAQTMVTE 
LADFTQGYKE YQVDTAAITP LKNLKEPTEI VVIIGTWCPD CHRETPRLIR IMEEINNPNI
KVTYIGVDRA KSDPQGLAAQ YEFTRIPTII VSQQGEELGR IIERPETSLE IDLAKILN