Gene Swoo_0255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0255 
Symbol 
ID6114478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp311173 
End bp311697 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content48% 
IMG OID641631736 
ProductDTW domain-containing protein 
Protein accessionYP_001758651 
Protein GI170724625 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.614012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTAT CGACAGAGCT GATTGTGTTA CAGGACCCCA GTGAAGTAGG CCATGCTAAG 
AATAGTGTAC GCTTGATGGA GTTAGTGATC CCCGAGACAC AAGTTTACGT GGGAGAAACA
CCGCAAGATT TTCAAGCGTT ACGTCACTAT CTGAATACCT GCGGTAAGCC GGTTTTTCTG
GTTTATCCGT CGGATTCGAG CTCTGATGTT GCCGAGACAA GTTTTACTGA GCAGGCTGTA
CTGTTACTGC TGGATGGTAC TTGGCGAAAA GCCTATAAAC TGCTGCAATT AAACCCTTGG
CTACAGGACT ATCCCGCGCT GCATCTTGAT CTGACATCGG CATCCAATTA TAAGATACGC
AAAGCCAGTA GAGCCGACAG TCTATCGACA CTGGAAGCGG CGGCTATGAT GTTGAAAGCT
ATTGAACCTG AGCTGCAGAT CACCCCGTTA ACCAATGCCT TAGATGCCAT GGTTCAACAG
CGTATTCGCT CTATGCCTCC GGCGGTTAGA AAACGCTATG AGTAA
 
Protein sequence
MQVSTELIVL QDPSEVGHAK NSVRLMELVI PETQVYVGET PQDFQALRHY LNTCGKPVFL 
VYPSDSSSDV AETSFTEQAV LLLLDGTWRK AYKLLQLNPW LQDYPALHLD LTSASNYKIR
KASRADSLST LEAAAMMLKA IEPELQITPL TNALDAMVQQ RIRSMPPAVR KRYE