| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0242 |
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| Symbol | |
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| ID | 6114465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 296901 |
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| End bp | 297842 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641631723 |
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| Product | cytochrome c nitrite reductase, NrfD subunit |
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| Protein accession | YP_001758638 |
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| Protein GI | 170724612 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTT TTCATTTTGA TGGTTTAATT TGGCACTGGC CAATTGCTAT CTATCTCTTT
CTTGCTGGGG TTTCTGCTGG GGCAATCTGT TTTGCTGTGT TACTCAAGCA GTTTAAGTTA
GGTGAGGATG CCTATAAATC CGGGTTTGTA CAAGCTGCAT GTTTGATCTC GCCATTAGCC
GTATTTGCTG GTTTAGGGAT CTTAGTGATC GATTTGACTA AGCCCTTCGA CTTTTGGAAA
ATTCTGGTGT TTTACAACCC AAGGTCTGTC ATGTCAGTAG GGGTTGCAGT ACTGCTTATC
TATCAAGTTG CGCTATTCGC TTGGTTAGCC TGTGTGTTTA AAGAGCCGGT GCTGACCTGG
TGTCAAGGGC GTTGGTCTGT TGTAGATAAA GGGTTTAAAG CTTTGATGAA GTACGAGGCG
ACGATTACCG GGCTTTTAGT GCTTTTAGCT CTGTCACTTG GCGCATATAC GGGATTTTTA
CTGTCGGCAT TGAGAACTTA TCCTATGCTG AATAACCCTG TATTGCCTTT GCTCTTCTTG
ATTTCAGGTA TCTCCTCTGG TGCCGCGGCC ACACTTCTCG GGGGGGTACT TCTTAAGGGA
AATCCAGACG GTAAAGAGGT TCACTTTATT CACAATATCG AGATCCCTAT TATCTTACTG
GAGCTGGTAC TGCTATTTAC TTTTTTTGCG GGACTTATCC TTTCAGGAGG GCAGAGCCAA
GTAGCTGCAT TAACTGCAAT AGGGGAAGGT TTCTGGGGAT GGGTATTCTG GGGAGGGGTA
GTTGTGATGG GCTTAAGTAT GCCCTTGGCA TTAAACCTGT TTATGAAGGC ATCATCGAAA
AGAAAATTCT CCTATGTTGC TATGACTGCG AGCTTCAGTT TAGTTGGCGT GCTGTTACTG
CGAAACTTTA TTCTCTATAC CGGTCAGATG ACGATCGCTT AA
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| Protein sequence | MNPFHFDGLI WHWPIAIYLF LAGVSAGAIC FAVLLKQFKL GEDAYKSGFV QAACLISPLA
VFAGLGILVI DLTKPFDFWK ILVFYNPRSV MSVGVAVLLI YQVALFAWLA CVFKEPVLTW
CQGRWSVVDK GFKALMKYEA TITGLLVLLA LSLGAYTGFL LSALRTYPML NNPVLPLLFL
ISGISSGAAA TLLGGVLLKG NPDGKEVHFI HNIEIPIILL ELVLLFTFFA GLILSGGQSQ
VAALTAIGEG FWGWVFWGGV VVMGLSMPLA LNLFMKASSK RKFSYVAMTA SFSLVGVLLL
RNFILYTGQM TIA
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