Gene Swoo_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0126 
Symbol 
ID6114349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp153464 
End bp153994 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content41% 
IMG OID641631607 
Producthypothetical protein 
Protein accessionYP_001758522 
Protein GI170724496 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCT ATTTTAGGCT GTTTTGGTTG TTTGTTTGGC GTGTACGCCA CTGTAACTCT 
ATCGGTTTTT TAGGCACCAG CCGTATTGCT TATCGTGCTT TGCCCTGTGA CTGTGATATC
AATTTTCACG TGACTAACTC TCGTTATCCT GCATTTTTGG ATCTGGCCAG AACCTATATG
TTGGCTGAAA TGGGCTTTTT GAACCGTTTT ATTAAACTAA AATGGATGCC GATTGTTAAT
GCGGCCGAGT TCACCTATAT CAGAGATATA AAACCTTTTA CTAAGTTTGA GATTGAAACC
AGGCTAGTAG GGTGGGATGA AAAGTATTTC TATATTGAAC AAAGGTTTGT CAGTGACAAT
ACCCTGCACT GTATCGTGCA TGTACGTGGT GTGTTTGTGT GTAAGGGTAA ACAAGTTCCG
ATTGATACCA TGGTGAAAGA GGTCAATTTT GAAGGCCCTG CCCCTGAACT GCCAGCAGAA
GTGGTGAAAT GGAAGGAGTT TTTGCAGTTA AAGAAAGAGC AAAACATGTA G
 
Protein sequence
MNLYFRLFWL FVWRVRHCNS IGFLGTSRIA YRALPCDCDI NFHVTNSRYP AFLDLARTYM 
LAEMGFLNRF IKLKWMPIVN AAEFTYIRDI KPFTKFEIET RLVGWDEKYF YIEQRFVSDN
TLHCIVHVRG VFVCKGKQVP IDTMVKEVNF EGPAPELPAE VVKWKEFLQL KKEQNM