Gene Swoo_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0123 
Symbol 
ID6114346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp148931 
End bp149707 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content46% 
IMG OID641631604 
Producthypothetical protein 
Protein accessionYP_001758519 
Protein GI170724493 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CACTGACACT CACACTACTA ACATGCTTGA TCAGTATGGC AGCTCCTGCT 
GCGGCTGACA CAAATTCGGC TATCGACGAC TCCCATAGCA CTAACAAATT CACGCCAAAT
CAAGACAATG AAACACAGTA TTTAATCGAT CTAGGTTGGG ACTCTGATTA TATCTCAGAG
GGGCGAAACA ACTTAGACAA AGGCGGCATC TTTTGGAGCA GCGCCGCTGT TCAACATGGA
AACCTCAATG TCTACGCCAC CATGGGCCGC GCCGATAGCC AGCACTACAC CGAGTGGAAT
TTAGGCCTGG AATACAGCAT AGCGCTGACT GAAAACTTGG AAACCACTTT AGGCTACCAA
AGAATAGAGT CTTATGGTGA TGAGCGTTGT AGCGACAATG AGCTGTTTGG CTCACTTAGC
TACTCAGGCG TAGAATGGCT GACTCCCTCG ATTAATTACA CCTATGCCAC AGAGGCCAGC
GGTTACTTTG TCGAGGCCAG CCTACACAGC AGTTGGGAGC TTTTAGATGG GTTTACATTT
ACCCCCTATG TAACTCAAGC CTTTGACTTT CAATATGCAA CCGAAGATCA CAATGGTCCG
AACCATTTCC AGTTTGGTGT CGAAGCTGAG TACCAGTTAG CTCAAAATGT CATTATCTCT
GGGCATGTTA GTCACACGAT CGCGCAAGAA GATATCAAAC TAGAAGCTAA GATGGATGAA
GTAGAATCCA GTTTAGATCA AACCTTTGCT GGGGTTCACT TAACCTGGGT ATTCTAA
 
Protein sequence
MKNTLTLTLL TCLISMAAPA AADTNSAIDD SHSTNKFTPN QDNETQYLID LGWDSDYISE 
GRNNLDKGGI FWSSAAVQHG NLNVYATMGR ADSQHYTEWN LGLEYSIALT ENLETTLGYQ
RIESYGDERC SDNELFGSLS YSGVEWLTPS INYTYATEAS GYFVEASLHS SWELLDGFTF
TPYVTQAFDF QYATEDHNGP NHFQFGVEAE YQLAQNVIIS GHVSHTIAQE DIKLEAKMDE
VESSLDQTFA GVHLTWVF