Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0102 |
Symbol | |
ID | 6114325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 123798 |
End bp | 124481 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641631583 |
Product | ThiJ/PfpI domain-containing protein |
Protein accession | YP_001758498 |
Protein GI | 170724472 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTC GAGATTTTAT CACTGCTGGC GGCATTGCTG TTGCGAGCGC CCTATTTGCA CCACACTTGT TTGCTACACC AAAGGGGAAG CCCTTGAAGA TTCTCGCTTT AGTGTTTGAT GATTATGAAA CACTAGACTT ACACGGTCCT GTTGAGATGC TGGGACATAT GAGTCATGTG CAGATTCTGT TGGTGGGGGC CAAATCTATC ATTAGAAGCT ATCAGGGCCC TAAAGTGGTG ACCGATATCT CGATGGAGCA GGTGACGCCC TGTGATCTTT TGATTGTCCC CGGTGGGATC GGCACCCGAA CACTCGTTGA GGACAGTGAG TTGTTGAGTT GGCTACAAGC TCAGGAAAAG GTCTCTAAGA AGGTGTTTTC TATCTGTACG GGCTCCGCTC TATTAGCTAA AGCTGGCATT TTAGACGGTG TTAATGCCAC GACCAATAAG ATGGCTTATC AATGGGTAAC AAGCTTATCT CAGAGAGTCC ACTGGCAACC AAGTGCACGT TGGGTTGATG AGGGGAAGTT TCTGACCTCA TCTGGCGTCT CCGCTGGAAC AGATGCAGCC CTGTTTTATG TCCGCCAACT ACGTGGTGAA GAGGAAGCAA GACGTATTGA ACGGTTAACT GAGTATCACT GGAATGATGA CTCGACTAAT GATCCTTATG CCGTTGAGGT GTAA
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Protein sequence | MKRRDFITAG GIAVASALFA PHLFATPKGK PLKILALVFD DYETLDLHGP VEMLGHMSHV QILLVGAKSI IRSYQGPKVV TDISMEQVTP CDLLIVPGGI GTRTLVEDSE LLSWLQAQEK VSKKVFSICT GSALLAKAGI LDGVNATTNK MAYQWVTSLS QRVHWQPSAR WVDEGKFLTS SGVSAGTDAA LFYVRQLRGE EEARRIERLT EYHWNDDSTN DPYAVEV
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