Gene Swol_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2557 
Symbol 
ID4282321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand- 
Start bp2915189 
End bp2916151 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content50% 
IMG OID638139441 
Product2-hydroxyglutaryl-CoA dehydratase activator 
Protein accessionYP_755215 
Protein GI114568061 
COG category[I] Lipid transport and metabolism 
COG ID[COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 
TIGRFAM ID[TIGR00241] CoA-substrate-specific enzyme activase, putative 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000851772 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGG CATATCTTGG TGTTGATGTG GGCTCGGTAA GCACTAACCT GGTAGTCTTG 
GACGAGAGTA ATGAGGTGGT GGCGGCGGAA TACCTGCGTA CCAGTGGCCA ACCCATTGTC 
ACCGTGCAGC AGGGGCTTTA TTCCATAGGC CAGAAGCTAA AGGGCCAGGT GGAGATAATC 
GGGGCTGGAA CTACGGGTAG CGCCCGTTAC CTCAGCAGCA TGATAATAGG TGCCGACATT 
GTGAAGAATG AAATCACGGC CCATGCTATT GCGGCTTCTG CGGTGGTGCC GGGGGTCAAT 
ACCATTATTG AAATCGGCGG GCAGGATTCT AAAATAATTA TACTGCGTGA GGGAGTGGTA 
ACCGACTTCG CTATGAATAC CGTATGTGCA GCTGGAACCG GCTCATTTCT GGACCAGCAA 
GCCAGCCGCT TGACCATAGC GATCGAAGAC TTTGGCAACC TGGCTCTGCA AGCAAAAAAT 
CCAGTTCGGA TAGCAGGACG TTGTGCTGTT TTTGCCGAAT CAGATATGAT ACATAAGCAA 
CAGCTAGGAT ATAATAACGA GGATATCATT GCTGGGCTAT GCGAAGCCCT GGTCAGGAAC 
TACATGAATA ATGTAGGTAA AGGCAAGGAG ATCCGGCCAC CGGTTTTATT TCAGGGGGGA 
GTTGCCGCCA ACCAGGGTCT GGTAGAAGCC TTTAAGAAAT ACCTGGAAAT GGATATTATC 
GTACCGCCGT GGTATGATGT TATGGGAGCC ATCGGGGCAG CCCTACTGGC CCGGAGGGCC 
GTGGAGAAGA AGCAAAAGAG CAGTTTCAAA GGTTTTAATA TCCGGGAGAT TACTTTTAAG 
ACCCGTAGTT TTGAATGCCA GGGTTGTTCA AATGCTTGCG AAGTGGTACA GTTTTTTGAG 
AATGATGATT TGATAGCCCG CTGGGGTGAT CGCTGCGGCA AATGGGAACT GCAGGCAGTT 
TAG
 
Protein sequence
MKKAYLGVDV GSVSTNLVVL DESNEVVAAE YLRTSGQPIV TVQQGLYSIG QKLKGQVEII 
GAGTTGSARY LSSMIIGADI VKNEITAHAI AASAVVPGVN TIIEIGGQDS KIIILREGVV 
TDFAMNTVCA AGTGSFLDQQ ASRLTIAIED FGNLALQAKN PVRIAGRCAV FAESDMIHKQ 
QLGYNNEDII AGLCEALVRN YMNNVGKGKE IRPPVLFQGG VAANQGLVEA FKKYLEMDII 
VPPWYDVMGA IGAALLARRA VEKKQKSSFK GFNIREITFK TRSFECQGCS NACEVVQFFE 
NDDLIARWGD RCGKWELQAV