Gene Swol_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_2424 
Symbol 
ID4281828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp2753764 
End bp2754966 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content48% 
IMG OID638139308 
ProductHD-GYP domain-containing protein 
Protein accessionYP_755084 
Protein GI114567930 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCCA AAAAAATGGT TTTAATTGGG CTAGTTCTTA CTGCTTTCTT TTCATCGCTG 
GCTGTTTTTG AGCTAATACC TGGCTTGCTT ATGGCTTTCT TGCTTTTATC TGTTGGAATT
GCTGTCACCT ATTATTTTGC TCTAAGCCGA ATGAGATTGG AAAGCTTGGC GGGTATCAGC
ATTTTGCTCA AGGCTGCTAA AGAGATAGGG AAGGAGAGCA AGGCTCCAGA AATCAGCCGG
CAGTTGGGTT TGTGGGCCCA AAGATTGGTA AAATCTGAAG CGGTCCTGGT CTGGTGGCAG
GGGGAATGGG CGTTTGGTGA TGAGGAATTC ACGGCCTGGC CCGGACTGGA AACGGCCCGG
GAGTGGGTTA AGAACAATAA TGAAGTTTTG GTTCTTAATC AAAATGGGGG GGAGATTTTT
TCCCATCCCT GGCCCAGCAA TATAAACTCA TTATTAGGCT TGCCTTTGAT GGTCGCCGGT
GAAGCAGCCG GGATACTATT CTTGCTTAAT GAAAGTAAGC GTGGGTATTT TGTCCCCCAG
GATAGTGAAG CTCTGGAAGT AATCTGCCAG CAGGCAGCGG CAGCTCTGAA CAAAGCCAGA
GATTATCAAG AGGTGGAATA TTTTTATAAG GAGATCTTGT TTTCTATGCT AAATGCCCTT
GATTCGCGTT TTCCTGGTTT TACCGGGCAC TCCCAGCGGG TGGCCCGAGT GGCGGTACTT
CTGGGTAGCA AACTAGGTTT GGATGAAGAA GAGTTGCGTA TTCTTGAATA TGCTGCCCTC
TTGCATGATG CTGGTAAAGT GTTTTTCTTG CAGGAAGGGC TTCCTGGAGA AGCGGGGGAA
TTGGAGGAAA TGGATAAGGA GCTTTCTGTA TTGCCGATGG AAGAACATCC GCCGCTGGGG
GCTCAAATTC TGCCTGATGA AGGTGTTTTT GCCAGGATAT GCCAAGGGAT TCTTTATCAT
CATGAGCGCT ATGATGGCAG CGGCTACCCT GAAGGCTTGA GCCGTACGGA TATACCCCTG
GCGGCCCGAA TAATTGCCGT GGCTGATCTC TATGATGCTT TAACCCGGCT TGCCCCCGAA
GAAGAAAGAC TGGAGCCGGA ATTTGCCATA AAAGAAATGA AAAAAACTAT GGGTATGCTC
TTGGACCCCC TGGTGGTAAT TGTTTTGGAG GAAGTGGAGC GGGAACTCGA TGAAATAACT
TAA
 
Protein sequence
MNSKKMVLIG LVLTAFFSSL AVFELIPGLL MAFLLLSVGI AVTYYFALSR MRLESLAGIS 
ILLKAAKEIG KESKAPEISR QLGLWAQRLV KSEAVLVWWQ GEWAFGDEEF TAWPGLETAR
EWVKNNNEVL VLNQNGGEIF SHPWPSNINS LLGLPLMVAG EAAGILFLLN ESKRGYFVPQ
DSEALEVICQ QAAAALNKAR DYQEVEYFYK EILFSMLNAL DSRFPGFTGH SQRVARVAVL
LGSKLGLDEE ELRILEYAAL LHDAGKVFFL QEGLPGEAGE LEEMDKELSV LPMEEHPPLG
AQILPDEGVF ARICQGILYH HERYDGSGYP EGLSRTDIPL AARIIAVADL YDALTRLAPE
EERLEPEFAI KEMKKTMGML LDPLVVIVLE EVERELDEIT