Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_2173 |
Symbol | |
ID | 4283154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2509003 |
End bp | 2510316 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638139053 |
Product | hypothetical protein |
Protein accession | YP_754835 |
Protein GI | 114567681 |
COG category | [R] General function prediction only |
COG ID | [COG2403] Predicted GTPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00111968 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAGCGA CTCGAGTAAT CATTATGGGT GCAGCCGGGA GAGATTTTCA CAACTTCAAT AGCTATTTCC GGGATAACCC GGCCTATGAG GTGGTAGCCT TTACAGCTAC ACAGATACCG GATATAGAAG GACGGCAGTA TCCGCCTGGA CTGGCCGGCA AGCAGTATCC GCAAGGCATA CCCATTTACG CGGAAGCAGA GCTGCCCGAA TTAATAAAGA AATATGATGT GGACCAGGTA ATCTTCGCTT ACAGTGATGT ATCCCACGAA TATGTAATGC ACCAGGCATC TCTGGTTATG GCTGCGGGAG CGGATTTTCG CTTGATGGGG CCTAAAACGA CCATGCTCAA GTCCAAACGC AAGGTAGTAG CGGTCACTGC GGTGAGGACT GGCAGCGGGA AAAGCCAGAC TACCAGGTAT GTGGCCGAAC TGATTACTGC TACCGGCAAA AAGGTGGCTA TTATCAGGCA TCCTATGCCC TATGGCAATC TGGAGGAGCA GCTGTGCATG CGTTTTGCCA GTTATGAGGA TCTGGACAAA TTTAAATGCA CCATAGAAGA AAGAGAAGAG TTTGAACCCC ATATCGATAA TGGCATGGTG GTCTATGCCG GGGTTGATTA CGAGGTTATT CTGCGCCAGG CGGAGGAAGA GGCGGATGTG ATTCTCTGGG ATGGGGGCAA CAATGATATT CCTTTTTATG CTTCCGACTT GCACATAGTA GTGGTTGATC CCCACCGTCC CGGGCATGAG ACCAGTTACC ATCCGGGTGA AACCAACCTG CGTATGGCCG ATATCGCTAT TATCAACAAG ATTGATTCCG CCGACCCCGC CAGGGTAGAA GCGGTTAAGG AAGCCATAAT CAAGAACAAC CCGCTGGCCA AAATCATCAT GGCCAACTCC CCGATTACGG TGGAAAACCC CGATTCCGTT AAGGGCAAGA AGGTTCTGGT GGTGGAAGAT GGCCCCACCC TGACACATGG GGAGATGGCT TATGGTGCAG GGGTAATTGC GGCGGAAAAA TTGGGTGCGG GCGAATTGAT AGACCCCCGT CCCTACGCGC TGGGCAGTAT CAAAGGAACC TTTGCCAAGT ATGGGCATTT GTCCCGATTG CTTCCGGCCA TGGGTTATGG AAAGACACAG ATTGAAGAAT TGGAACAGAC TATTAATAAC TCACCGGCGG AGGTAGTGGT TATCGGAACC CCTATCGACC TGCGCCGGGT CATGTCCATA GACAAGCCGG CCGTAAGAGT GCGTTATGAT TTGGAGGAAA TCGGCCATCC CCAGCTGGCG GAACTGCTGG CGAAGGTGCT GTAA
|
Protein sequence | MKATRVIIMG AAGRDFHNFN SYFRDNPAYE VVAFTATQIP DIEGRQYPPG LAGKQYPQGI PIYAEAELPE LIKKYDVDQV IFAYSDVSHE YVMHQASLVM AAGADFRLMG PKTTMLKSKR KVVAVTAVRT GSGKSQTTRY VAELITATGK KVAIIRHPMP YGNLEEQLCM RFASYEDLDK FKCTIEEREE FEPHIDNGMV VYAGVDYEVI LRQAEEEADV ILWDGGNNDI PFYASDLHIV VVDPHRPGHE TSYHPGETNL RMADIAIINK IDSADPARVE AVKEAIIKNN PLAKIIMANS PITVENPDSV KGKKVLVVED GPTLTHGEMA YGAGVIAAEK LGAGELIDPR PYALGSIKGT FAKYGHLSRL LPAMGYGKTQ IEELEQTINN SPAEVVVIGT PIDLRRVMSI DKPAVRVRYD LEEIGHPQLA ELLAKVL
|
| |