| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_2095 |
|---|
| Symbol | |
|---|
| ID | 4283216 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2411400 |
|---|
| End bp | 2412083 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638138976 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_754758 |
|---|
| Protein GI | 114567604 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.142349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATAA TTACGGTCTC CGGACCGCCC TCATCAGGGA AGACTTCGGT CATAATTAAA
ACAATTGAAT ACCTGAAAAA AGACCAGTTG GAGATAGGCG TAGTTAAGTT TGACAGTTTA
TCAACCTATG ATGATCAAAT GTATAAAAAA TTAGGGGTGA AAGTAAAAGT TGGCCTTTCC
GGCAATCTTT GTCCGGATCA TTATTACATG ACCAATATAG AAGATTGTGT TAAGTGGGGG
GTTAGCGAAA AGCTGGATAT GCTTATAAGT GAAAGTGCCG GCTTATGCAA CCGCTGTTCT
CCACATATAC GAGATGTATT GGCCATATGC GTTATTGATA ATTTATCCGG TATAAATACT
CCTAAAAAAA TCGGGCCTAT GTTAAGACTG GCGGATATTG TGGTAATAAC TAAAGGGGAT
ATAGTATCGC AGGCGGAACG GGAAGTATTT GCCTTTAGAG CCAAACAATC TAGCCCCAGG
GCCTCTATAG TATTCATTAA TGGCATAACC GGCCAGGGGG CCTATGATTT GAGCCTGCGC
CTGAAAGAAG CTAATGACTA TGAAAGTGTT ATAGATAAAA AACTGAGATT TTCGATGCCC
GCGGCAGTTT GTTCCTATTG TACGGGAGAG ATAAGAATAG GGGAAAGGTA TCAGACTGGC
AATATAAAGA AAATAAAGCT CTAG
|
|---|
| Protein sequence | MKIITVSGPP SSGKTSVIIK TIEYLKKDQL EIGVVKFDSL STYDDQMYKK LGVKVKVGLS
GNLCPDHYYM TNIEDCVKWG VSEKLDMLIS ESAGLCNRCS PHIRDVLAIC VIDNLSGINT
PKKIGPMLRL ADIVVITKGD IVSQAEREVF AFRAKQSSPR ASIVFINGIT GQGAYDLSLR
LKEANDYESV IDKKLRFSMP AAVCSYCTGE IRIGERYQTG NIKKIKL
|
|---|
| |