| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1950 |
|---|
| Symbol | |
|---|
| ID | 4283377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | - |
|---|
| Start bp | 2228634 |
|---|
| End bp | 2229359 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638138833 |
|---|
| Product | ABC-type cobalt transport system permease component CbiQ and related transporters-like protein |
|---|
| Protein accession | YP_754618 |
|---|
| Protein GI | 114567464 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTATTAG ATCCCCGAAG CAAAATGATA ATGGTTATAT GTATTTCCAG TCTAGCTTTG
ATCTATAATA CCCCGGCTCG ACTTCTTCAG CTTCTTCTGG TTACGCTAGT ACTACTATTT
ATTTTTAGTT TTAATCTGAG GGTAATTGCC GGTTACCTTA AACCTTTTAT ATTCTTGATG
TTTTTTCTTT TTGTAGTACA GAGTATTTTT TCGCCAGGGG ATAGGGTAAT TCTATCCTTA
GGACCAGTAT CCCTGATAAG TATCGAAGGT GTTCTTGCAG GAGCCACTGT AGTTTTACGC
TTGCTTGTTA TTACAGCAGC TGCCATGCTT TTCACTACTT TTAGTTCCCG GGACTTTATC
CTGGGGTTGG TTCAGTGGAA AGTTCCTTAT GAAATAGCCT TTATGGTATC CACCGCCCTG
CGTTTTTTAC CGCTTTTTCG GGATGAATTG AAAAATGTGC TTACAGCCAT ACAATTAAGG
GGAGTTGATT TAAAAAAGGT GCCTTGGAGA AAAAAGATGG TGATGTATCG ACGTTTGACT
TTTCCTGTGG TATATAGAAA TATGCTGAAA GCAGAACAAT TGGCGATAGC GATGGAAGCT
CGAGCTTTCA GGGCTTACCC CCAACGTACT TATCTTAGAC AACTCAATTT GCAGAGGGTT
GACTATGTAG TAATACTGGT TTCCCTGCTC GTTACTTTCA TCCTTATAAT GCGCTACATT
GGCTAA
|
|---|
| Protein sequence | MLLDPRSKMI MVICISSLAL IYNTPARLLQ LLLVTLVLLF IFSFNLRVIA GYLKPFIFLM
FFLFVVQSIF SPGDRVILSL GPVSLISIEG VLAGATVVLR LLVITAAAML FTTFSSRDFI
LGLVQWKVPY EIAFMVSTAL RFLPLFRDEL KNVLTAIQLR GVDLKKVPWR KKMVMYRRLT
FPVVYRNMLK AEQLAIAMEA RAFRAYPQRT YLRQLNLQRV DYVVILVSLL VTFILIMRYI
G
|
|---|
| |