Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1871 |
Symbol | |
ID | 4283537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 2133798 |
End bp | 2135153 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638138754 |
Product | glycosyl hydrolase-like protein |
Protein accession | YP_754540 |
Protein GI | 114567386 |
COG category | [R] General function prediction only |
COG ID | [COG3858] Predicted glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00112913 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGATTCA GTAGGTACAT ATTATTCGTG GTGCTGTTGG CTTTTACATA TCTCCTGATT TTTCCCGCGC TTACAATGGC TTCTAGCCCT GCAATAAGAA TCGATGGCGA GCTGCGCAAT TTTAGCCTGG GAGCCCAAAT AGTCAACAAC CGGACCATGG TTCCGATCCG TTTTGTGGTG GAAGATGAGG CTCTGCAAGG AGAGGTTTTT TGGGATGCCT CCTTGCGTAA GGTGGCGATG AATTGCCGGG GTAAATATAT AGAAATGTTT ATCGGCAGCA ATGAGGCCTG GGTTGATGGG GAAAAGCGTT TCCTGGATTC TCCGCCGTAT ATATTTGAAA GCCGAACTTT TATCCCCCTG CGCTTCCTGA GCGAAAATCT AGGAGCAATG GTAAACTGGG ATGCTCAAAA AAGCGAAGTG CTAATCAATT TTAAGTACCA ACCCCGGGTT TTTGCTTATT ATTACCGTTC TTTCGCTGAG TACCAGGAGA ATATTGACTT ATTCTCCGAT GTGGCTTTCC GCTGGTTTGA AACCAACGGA CGGGGAGAAA TTTTTTATGA ATACCAGGAT CGTTTTGCTG AGGCCCTTGA TTTAGCGCGG AACAAAGGGG TAAAAACCCA TGCTAGTGTT GTTCTCATGG GGAAGGATGC TTTGCACCAG TTGCTGAGCA ATTCGGAAAA CCGTGCTCGT TTGATTGCCA ATCTACTGGA TGTAGTGAAA AAAGACCGTT ATGATGGAGT GAATATTGAT TTCGAACTAC TGGATCCAGG TGATGCCGGG AATATGACCT TATTTCTCCA GGAATTGAAG ACCTCTTTGG GAACGGACAA AAAGCTTTCG GTGGCTGTAT TTGCCCGTAC CGGCAAGGAA AAATGGCCGG TTGGTTATGA GTATAAAAAG ATTGGACAGA TCGCAGATTC AGTCGTAGTA ATGGCTTATG ACTATAGTTA TTCTACAACG GCACCGGGAC CAGTGGCTCC CCTCTGGTGG GTTAGAGAAG TTTGCAGTTA TATGCGAAGC GTGATTCCTC AGGACAAAAT ACTACTGGGT TTGCCTACCT ATGGATATGA TTGGGGTGCA GGGAAGAATG CGGTTACGAT TACAGCGCCA AAACTGGAAG CATTGGAAGC GAGATACGGG TTGCAAAAGG ATTTTGATTA CCCGAGTATG AGCCCCTGCT ACAGCTATTA TGACGAAGAG GGAAAGTATC ACGAAATCTG GTTGGAAAAC GAAGCCAGTC TGAAGGAGAA GCTTAATCTG GTTCAGGAAA ATCGATTGGG AGGAGTTTCT TTTTGGAGAA TAGGTAATGG TTTTGCGGAT CTATACCGGC TGCTGGAGGG ATGGCGAGGG AAGTAA
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Protein sequence | MRFSRYILFV VLLAFTYLLI FPALTMASSP AIRIDGELRN FSLGAQIVNN RTMVPIRFVV EDEALQGEVF WDASLRKVAM NCRGKYIEMF IGSNEAWVDG EKRFLDSPPY IFESRTFIPL RFLSENLGAM VNWDAQKSEV LINFKYQPRV FAYYYRSFAE YQENIDLFSD VAFRWFETNG RGEIFYEYQD RFAEALDLAR NKGVKTHASV VLMGKDALHQ LLSNSENRAR LIANLLDVVK KDRYDGVNID FELLDPGDAG NMTLFLQELK TSLGTDKKLS VAVFARTGKE KWPVGYEYKK IGQIADSVVV MAYDYSYSTT APGPVAPLWW VREVCSYMRS VIPQDKILLG LPTYGYDWGA GKNAVTITAP KLEALEARYG LQKDFDYPSM SPCYSYYDEE GKYHEIWLEN EASLKEKLNL VQENRLGGVS FWRIGNGFAD LYRLLEGWRG K
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