Gene Swol_1687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1687 
Symbol 
ID4282087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1914570 
End bp1915706 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content45% 
IMG OID638138564 
Productperiplasmic binding protein 
Protein accessionYP_754356 
Protein GI114567202 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.372146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGTC AGAGAATCGT CACTGACTTA TGGAGAGGAG GAATAAAGTT GAAAAGAAAG 
CGAAGCTATA TAATCTTTCT GAGCATACTG GCTTTGCTGC TGTCTTCTGG TTTGGCTGGC
TGCAACAAAG AAAAGACGCA GGAAACAGTG GTGCCAGCAG AGCCCGGTAT GCGTACAGTT
GTGGATATGG CGGGACGGGA AGTTAGTGTA CCCAAACAAA TCAAAAAGGT GTTTTCCACC
AACCCGCCGG GGACTATCTT GCTTTATACC ATGGATCCCG AGTTGTTAAT TGCCTGGAAC
TACTACCTGG GAGAGGCGGA GAGAAAGTTT ATCCTTCCCC AGTACCATGA ATTGCCCAAC
CTGGGTGGTT GGATGGCTAA AACTACCTGC AATACCGAGG AATTATTAAA AATAGGGCCG
GATTTGATTC TCTATATGGG TGATATTAAT GATATGAGCA AATCTCAAGC CGACGATATT
CAAAAACAGG TCAACATCCC AGTTGTTATG GTAAATGGCG ATCTTACTAA AATGGATGAA
ACTTATGATT TTACCGGCAA GCTTCTAAAT ATGGAAAAAC AAGCTGAATT ACTGGGCAGC
TATTGCCGGG AAACGGTAAA ACAGGTGCAA GCCAAAAGCA AAAATATTGC TGAGGATAAG
CGAGTGCGGG TGTATTATGC CGAGGGTGCC AGCGGCTTGG AGACTGATCC TTGTGGCTCC
CGCCATACCG AGGTTTTGGA TATGGTGGGT GGAGTTAATG TGGCTGATGT AATTGCCAAA
GGGGAGCGCG GCATGACCCA GGTTTCCCAT GAACAAGTAC TGTTATGGAA CCCCGACCTG
ATTATTTGCT GGGGACAGTG TTTTAAAGAA ATATTTAGTG ATAGCAAGTG GCAGAACATA
AAGGCCGTAC AGGACCAAAA AGTCTATATG GTGCCCAGTG GTCCCTTTAA TTGGTTTGAT
CGTCCGCCTT CGGTAAATCG TATACTGGGT CTGAAATGGC TGGGGAACTT GCTTTATCCC
GAGGTATATG CTTACGATAT AGCTAAAGAA ACCCGGGAGT TTTACCAAAA GTTTTATCAT
TATGATCTTA CGGATGAGGA TATAACTTTT CTGTTAAAGG ACTCCGGTGG CAAGTAG
 
Protein sequence
MASQRIVTDL WRGGIKLKRK RSYIIFLSIL ALLLSSGLAG CNKEKTQETV VPAEPGMRTV 
VDMAGREVSV PKQIKKVFST NPPGTILLYT MDPELLIAWN YYLGEAERKF ILPQYHELPN
LGGWMAKTTC NTEELLKIGP DLILYMGDIN DMSKSQADDI QKQVNIPVVM VNGDLTKMDE
TYDFTGKLLN MEKQAELLGS YCRETVKQVQ AKSKNIAEDK RVRVYYAEGA SGLETDPCGS
RHTEVLDMVG GVNVADVIAK GERGMTQVSH EQVLLWNPDL IICWGQCFKE IFSDSKWQNI
KAVQDQKVYM VPSGPFNWFD RPPSVNRILG LKWLGNLLYP EVYAYDIAKE TREFYQKFYH
YDLTDEDITF LLKDSGGK