Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1654 |
Symbol | |
ID | 4282505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1881328 |
End bp | 1883028 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638138530 |
Product | endopeptidase La |
Protein accession | YP_754323 |
Protein GI | 114567169 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1067] Predicted ATP-dependent protease |
TIGRFAM ID | [TIGR00764] lon-related putative ATP-dependent protease [TIGR02902] ATP-dependent protease LonB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAT TTTTTGTCCA ATATAGCGGT ATCCTCTACT TGATACAATT GTTCTTTGCG ATAGTGATAG GCTTATATTT TTGGAATCTC TTGAAGAACC AGCAGAGCCA TAAAACCGTA ATGGTAAAGG AATCGGAAAA AGAGAGTTCC AGGTTAAAAC AGATGCGTAA CATAAAGCTT AGTGAGCCCT TATCCAGTTT GACCCGTCCT GCTCAGATGG ATGATATTAT CGGACAAAAG GAAGCAGTCT CCATTCTTCG TTCTGCTCTT TGCGGGCCCA ATCCGCAACA TGTTATTATA TTTGGGCCTC CTGGGGTAGG TAAAACTGCG GCGGCACGGC TGGTATTGGA AGAGGCTAAA AAAAACCCCC TGTCTCCCTT TGGAAAAGAT GCCAACTTTG TAGAAGTTGA TGCCACCATA AGCCGCTTTG ACGAAAGAAA CATAGCTGAT CCCTTGATTG GTTCAGTGCA CGATCCCATA TATCAGGGGG CTGGATCTAT GGGCTCAGCC GGCATTCCTC AACCCAAGCC GGGAGCTTGT ACCCGAGCCC ATGGGGGTAT TCTTTTTATA GATGAAATCG GCGAATTACA TTCTTTGCAG ATGAACAAAT TGCTAAAAGT TTTAGAAGAT AGAAAAGTTA TGTTGGAGAG TGCTTATTAC ACAGAATACA ACCGGACTAT CCCGGTATAT ATTCATGAGA TATTTAACCA TGGGCTGCCT GCTGATTTTC GCCTGGTAGG TGCTACCACG CGCTCACCGG ATGAATTATC GCCTGCTTTG CGTTCACGCT GTCTGGAGAT CTTTTTTAAT CCCCTTACTA AAGAAGATAT AGAACGGATA ACCCTTAATG CGGCAAAAAA AATCAATTTT CCCCTGGAGC CTGCAGCTTT GGAGGAAATA AGCCGCTATG CCAATAATGG AAGGGAAGCG GTTAATATGG TTCAACTCTC GGCGGGAATA GCACAGGTGG AAAAACAGAA TAAAATAAGC CTGTCTATCG TGGAAAAAGT TTTGAATAAT GGCCGCTTTT CACCGCGCCG GGAAATCAAG ATTAAGGAAG AAGCAATGGT TGGAGTAGTA AATGGACTGG CTGTCATCGG GGCTAATATG GGCACTTTAC TGGAGGTAGA GGCGGCTGCT TTATCTGTGC CCAAAGGCCA GGGAAACTGG ACGGTTACCG GAGTGGTAGA TGAAGAACAA CTGGGAGGAC AGGAAAGACA AGTCCGGCGT AAGAGTGCGG CCCGGGGAGC GGTAGAGAAT GTTCTTACCG TTTTGAGGTC TATTTATGGT TTGGAAATTG GCGATTACAA TATCCATCTT AATTTTCCCG GGGGTATTCC TGTAGATGGA CCTTCGGCTG GTATAAGTAT GGCCACTGCC ATCTATTCAA GTATCACCGG TAAAGTAGTA GATAATCTTT TAGCTATGAC CGGGGAAATC TCTGTCTATG GCAAAGTCAA GCCAGTGGGA GGTGTTATAG CTAAAATTGA GGCTGCCCGC AGGGCTGGTG TGCAAAAGGT CATTATCCCG GCAGAAAATT GGCTTAATAT TTTTGACGAT TTTCCTGATT TAAAGGTAAT TCCGGTTCGA GATTTGGATG AGGTCTTTAT CTGGGCATTC CTTGAGCAGG AAGTATTTCC CGCTACTACA GATAAACCGC TGCCAACGAT TAATGAGCTT GGCCTTGGTG TTTCAACTTG A
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Protein sequence | MNEFFVQYSG ILYLIQLFFA IVIGLYFWNL LKNQQSHKTV MVKESEKESS RLKQMRNIKL SEPLSSLTRP AQMDDIIGQK EAVSILRSAL CGPNPQHVII FGPPGVGKTA AARLVLEEAK KNPLSPFGKD ANFVEVDATI SRFDERNIAD PLIGSVHDPI YQGAGSMGSA GIPQPKPGAC TRAHGGILFI DEIGELHSLQ MNKLLKVLED RKVMLESAYY TEYNRTIPVY IHEIFNHGLP ADFRLVGATT RSPDELSPAL RSRCLEIFFN PLTKEDIERI TLNAAKKINF PLEPAALEEI SRYANNGREA VNMVQLSAGI AQVEKQNKIS LSIVEKVLNN GRFSPRREIK IKEEAMVGVV NGLAVIGANM GTLLEVEAAA LSVPKGQGNW TVTGVVDEEQ LGGQERQVRR KSAARGAVEN VLTVLRSIYG LEIGDYNIHL NFPGGIPVDG PSAGISMATA IYSSITGKVV DNLLAMTGEI SVYGKVKPVG GVIAKIEAAR RAGVQKVIIP AENWLNIFDD FPDLKVIPVR DLDEVFIWAF LEQEVFPATT DKPLPTINEL GLGVST
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