| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1574 |
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| Symbol | |
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| ID | 4282178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | - |
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| Start bp | 1792471 |
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| End bp | 1793841 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638138454 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_754248 |
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| Protein GI | 114567094 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000454579 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG TAGCTTTTCA TACCCTGGGA TGCAAAGTAA ACCAGGTAGA AACAGAACAG
CTGAAGGAAA AGTTCATACA AAGAGGCTAT CAACTGGTTG ACTTCAATGA AAGCGCGGAT
TTGTACATCG TTAACACCTG CACTGTGACT CACAGCAGCG ACCGCAAATC CAGAGCCATG
CTGCGCCGTG CTGCCAGAAG GAATCCGGGA GCGATGGTCG TTGCTACCGG TTGCCTGGCC
CAGGTAGATG CCGCGCAACT GGCAGCCATA CCCGGACTGA ATCTAATAGT AGGCAGTCAG
CAAAAAGAAG CTATTCTCGA ACTGATTGAA GGACAGGTAA GCAGTAGGAG CGAGTCGGAG
CCCCTTATTG TATGCCCACC GCTGGTGGCG GGAAAAAAGC TCCCCCCGGT TATCTATTCT
AAGCGGCATG AAAGATCCCG AGCTTTTGTC AAGATTCAGG ATGGATGCCA GAGTTATTGT
TCTTACTGTA TCGTCCCTTT TGCCCGCGGT CCTTCCCGGA GCAAACTGCC AGAAGATGTG
GCAGCCGAGT TGCAGCAACT GGTGGATCTG GGATATCACG AAATCGTATT GACCGGTATT
CATACCGGGC TTTATGGAAA TGACCTGGAA GATTGGAACC TTAGTAGATT GCTGCGGTTG
CTTTTCGCTC GGGTGGAAGG TAATTACCGC ATCAGGTTGA GTTCCCTGGA GCCTGTGGAG
ATAGACGAGG AGTTGTTGGA GATGGCAGCC GGCGGAGAAA GGCTTTGCCG TCACTTTCAT
ATTCCCTTGC AGAGTGGAAG CAGCCGCATA TTGCGGGCCA TGAACCGCCG TTATGACCGG
GAATTCTATT ACAAACTGGT TCAGCATATA GTACAGAGAG TAAAGGGAGC GGCCGTAACC
GCCGATGTAA TGGTGGGCTT TCCCGGTGAA GAAAAGAAGG ATTACCAGGA TACCCTGGCT
TTGTTACAGG ATTTACCCGT ACTGGACTTG CATGTATTTA AATACTCAAA ACGACCGGGA
ACGGCTGCCG CTAAAATGGA ACCTCAGGTC AGTGACAGAG AAAAAGAAAT GAGAAGCGCC
GAACTAATAC AACTGGCTGA AGCAAAAAAG CGGAGTTTCA TAAACCAGCA GCTGGGACAG
GAACTGGAAG TGCTGGTAGA GCAGATAGTA GGAGAAGACT CTTTCCGGGG TCTTAGCGAT
AACTATTTAG AACTGGAGTT TTCTTCCCCC CGGGAACTGA TTGATGAGCT GACCGGAGAA
CTAATCATGG TCGAGCTGGA AGCTATGGAA AACAGCATTG CCCGGGGGAG GTTATTATAT
GGCTCTTTTC TAATAGAACC CTACTGCCAC AATACTGACC AGGAAGGATA G
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| Protein sequence | MKKVAFHTLG CKVNQVETEQ LKEKFIQRGY QLVDFNESAD LYIVNTCTVT HSSDRKSRAM
LRRAARRNPG AMVVATGCLA QVDAAQLAAI PGLNLIVGSQ QKEAILELIE GQVSSRSESE
PLIVCPPLVA GKKLPPVIYS KRHERSRAFV KIQDGCQSYC SYCIVPFARG PSRSKLPEDV
AAELQQLVDL GYHEIVLTGI HTGLYGNDLE DWNLSRLLRL LFARVEGNYR IRLSSLEPVE
IDEELLEMAA GGERLCRHFH IPLQSGSSRI LRAMNRRYDR EFYYKLVQHI VQRVKGAAVT
ADVMVGFPGE EKKDYQDTLA LLQDLPVLDL HVFKYSKRPG TAAAKMEPQV SDREKEMRSA
ELIQLAEAKK RSFINQQLGQ ELEVLVEQIV GEDSFRGLSD NYLELEFSSP RELIDELTGE
LIMVELEAME NSIARGRLLY GSFLIEPYCH NTDQEG
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