Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1515 |
Symbol | |
ID | 4281874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1736547 |
End bp | 1738613 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638138395 |
Product | glycine--tRNA ligase |
Protein accession | YP_754189 |
Protein GI | 114567035 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCGCAAG ATCTACTGCT GGAAATCGGG GTGGAGGAAA TGCCTTCTGC TTATATGCCC CGAGTATTAA AGGATTTGAA AGATTTAGCT CAGAAAAATC TGGCTGAGGC TCGTCTGAGC TGCGGGGAAG TCTTGACGTT GGGAACACCT CGCCGGCTTT GCCTCTGGGT GAAGGAAATA AGTGAAGAGC AGGAAGATTC ATTGTTAGAA AATAGAGGAC CGAAAAAAAG CATTGCCTTT GATGCTAATG GGAATCCCAG CAAAGCAGGG CTGGGGTTTG CCCGCAGCCA GGGAGTTGAT TTCCGTGAAT TGCAGATACG AGAAGTAAGC GGGGTGGAGT ATCTTTTTGC GATCAAAAAA GAAAAAGGAC AGGCGGCGGA GCAAATTCTG CCTGGTTTGC TCTTAAAAGT GATTCATTCC CTCTCCTTCC CTAAATCCAT GACCTGGTCC TATTATCAGA CCCGTTTTGC CCGCCCTATT CGTTGGCTTT TGGCTATATT TGGGGATAAA AATGTGGAAT TCAACATAGA AAATATTAAA AGTGCTAATT ATACCTATGG GCACCGCTTC CTCTCTACGG GAGTGCTGCT AGTAACGAGT ATTGACGATT ATTTTCGAGT CTTGCGTGAG CATTATGTCA TATTGGATCA AGCCGAGAGA AAAAAGATGA TCTGGCAGCA GGTACAAAAG GTGGCGGGCG AAGCTGGCGG TAAAGCCATG GAGAATGAAG AGTTGCTGGA GGAAGTTGCA TTTCTGGTGG AATTCCCTAC GGCTTTTTAT GGCGAATTTT CTCCCTCCTA TCTGGATGTT CCACCTGAGG TCTTAACTAC CTCCATGATT GAACACCAGC GCTATTTTCC GGTTTATAAT AATGAGGGTA GGCTTTTACC CGGTTTTGTT GGAGTGAGGA ACGGAACTGA TTATTGTCTG GATATCGTTA GAGCGGGAAA CGAACGGGTT TTAAAGGCCC GGCTGGAAGA TGCGCTCTTT TTCTGGAATG AAGATAGCAG GAAATCCCTG GAGGAAATGA GCGCTAAACT GAAAAATGTT CTTTTTCATG AACGCTTGGG AACCCTGGCC GACAAGGTAC TGCGCCTGCA GAAGCTGGCT CTCTTTATTG GGCAGCAAAC GGGACTGGGC CAGCCGGAAA AATTGCAGCG TTCCGCTTTG CTTTGCAAGG CTGATCTTAT GAGTAATATG GTTTATGAGT TTCCTGAACT GCAGGGCATT ATGGGCCGTT ATTATGCAAG CGGAAGTGCT GAGGAGCCCG AGGTTGCAGA GGCCATTTTT GAGCATTACC TGCCCCGTTT TGCTGGTGAT AAGTTGCCTT CCAGTGCGGG CGGTATAGTT CTTAGCCTGG CGGAGAAAAT GGATAATCTG ATGGGTTGTT TCTCCATCGG GATAAAGCCC AGCGGTTCCC AGGATCCTTA TGCCTTGCGC CGGCAGGCCC TGGGATTAGT AAACATCATT CTGGACAAAA AGCTGAGTAT AGACTTGAAG CTGGTTTTTG AGCAGGCGTA TCTGGGATAT AAGGATATTG ATCTGGAAAA GAGCAGGGAA GATAGTGTTA AAGAACTCCT GGATTTTATA TACCAGAGGA TGCGAGGCGT ATTACTGGAT AACGGGATTT CTTATGATGT GGTTGACGCT GCTCTGTCCC GGCCTTCTTT TGATTTATTC GAAACTTATT ACCGGGCCTT TAAGTTGCAG GAATTTAAGA AATCACCGGT GTTTGAGGAT TTTATGGTAG TTTATAACCG GGTCCATAAT CTATCGCGGA AATGGGAAAG TGAAGAAATT GACCTGGATC TATTGGTGGA TGAAAGTGAA AAGAACTTGT GCCAGAAACT ACCTGGGCTC CAGGAAGACA TTAAAAAATC ACTGATAGCC CAAGACTATA CCCGGGCACT GGAACTTCTC GCTGCTCTCA GAGCGGATAT AGACCAGTTC TTTACGGCCG TAATGGTGAT GGTAGACGAT GAGAGGCTCA AAGCAGCTCG TTTAGGCATC CTAAAATCAA TTGCCAATAT GTTCAACTCC ATCGCAGATT TCAGCAAAAT TGTATAA
|
Protein sequence | MAQDLLLEIG VEEMPSAYMP RVLKDLKDLA QKNLAEARLS CGEVLTLGTP RRLCLWVKEI SEEQEDSLLE NRGPKKSIAF DANGNPSKAG LGFARSQGVD FRELQIREVS GVEYLFAIKK EKGQAAEQIL PGLLLKVIHS LSFPKSMTWS YYQTRFARPI RWLLAIFGDK NVEFNIENIK SANYTYGHRF LSTGVLLVTS IDDYFRVLRE HYVILDQAER KKMIWQQVQK VAGEAGGKAM ENEELLEEVA FLVEFPTAFY GEFSPSYLDV PPEVLTTSMI EHQRYFPVYN NEGRLLPGFV GVRNGTDYCL DIVRAGNERV LKARLEDALF FWNEDSRKSL EEMSAKLKNV LFHERLGTLA DKVLRLQKLA LFIGQQTGLG QPEKLQRSAL LCKADLMSNM VYEFPELQGI MGRYYASGSA EEPEVAEAIF EHYLPRFAGD KLPSSAGGIV LSLAEKMDNL MGCFSIGIKP SGSQDPYALR RQALGLVNII LDKKLSIDLK LVFEQAYLGY KDIDLEKSRE DSVKELLDFI YQRMRGVLLD NGISYDVVDA ALSRPSFDLF ETYYRAFKLQ EFKKSPVFED FMVVYNRVHN LSRKWESEEI DLDLLVDESE KNLCQKLPGL QEDIKKSLIA QDYTRALELL AALRADIDQF FTAVMVMVDD ERLKAARLGI LKSIANMFNS IADFSKIV
|
| |