Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1194 |
Symbol | |
ID | 4282672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1381007 |
End bp | 1382620 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638138067 |
Product | grkA; spore germination protein, GrkA |
Protein accession | YP_753874 |
Protein GI | 114566720 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.616884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGTT TTCTTTTCAA AAAACTACAT TTTAAAAGAA TGTCAAAAGA TATTCATAAA AAGGCTGCAG GACATTTTAA TTCCGCTGTC AGCCTGTCCA AAAACCTGGA GGAAAACCTG AAGATTTTAA GGGAGGCTCT TGGTTCAAGC AATGATGTAA TCATTCGTGA GATAAAAATT AGCCCCCATT CAAATGTTGA TGCGGCCGTT ATCTATATTG ATGGTTTAGT GGATAGAAAT TTATTAAACC ATGATATTTT GCAACCATTG ATGTTTAACC TGCAAATGAT TAAGGATAAT GCCAGCCATA ACCACACGAG CCTGATTGAT TATATTAAAT CAAGTGTGTT AAATGTAGGA CAGATAACTG TAGTCCAGGA TATAGACAGA GTTATTGCCC AGGTTCTTAC AGGTCATATT GCCATTTTGG CAGAAGGTGT AAGCCGGGCC CTGCTTATTG ATGCCAAGGG TTGGGAAACA CGACGTATCG AAGAGCCTAA AAACGAGTTG TCGGTTCGAG GATCAAAAGA AAGTTTTACT GAAACTCTGC GTACCAATAC AGCTTTGCTG CGGCGAAAAA TACGCGATCC TCATTTAACT TTTCAGAGCC TGCAAATTGG GGAGCGGTCG AAAACCGATC TTTCAATTGT TTATATCAAG GGTATCACCC CGGAAAACCT CATCGAAGAA ATCAATCAAC GGCTGCAACG AATAGATACT GATACTATTT TGGATGTTAG TTACATAGAA CAATTCATTG AAGATAGCCC CAACTCGTTA TTTCCCACCG TTGGCAGCAG TGAAAGACCA GATGTAGTGG TAGCCAGAAT ACTGGAGGGT CGAGCCGCCA TATTGCTTGA TGGCTCCCCG ATGGCCCTGG TGGTACCCTT CTTATTTATT GAAGGTTTTC AAAACCCGGA CGATTATTAC GCCCGGCCAT TTTTCGCTAC ATTGGTGCGG TGGATTCGAT TGCTGGGTTA TTTGCTCAGT ATCTATTTGC CTGGTATTTT TGTTTCCTTA AAAACTTTTC ATCCCGAATT ATTTCCTACC CAATTGCTGA TTTCGGTGGC GGCAGCGCGG GAAGGGCTAC CTTTACCAGT TGTATTAGAA GCCCTGTTAA TGCTGCTCTT GTTCGAAATT TTGCGGGAAG CCGGTCTCAG GATGCCCCGC TCACTGGGCC AGGCTGTCAG TATTGTAGGT GCGCTGGTAA TCGGTCAGGC AGCAGTATCA GCTGGTTTAG TTGGAGCACC CATGGTAATA GTAATAGCCA CTACAGCTAT TGCTTCATTT TTAGTCATCC CTTATGCTGA TTCGGGAACC TTGTACCGCT TTATAATGAC GGTAGCGGGC GGTTTGCTGG GTTTATTTGG TATAGTTTTG GTTTCCCTTG AAATGCTTAG CCACCTGGCT TCTCTACGCT CCCTGGGAGT AGCCTATTTA TCGCCGGTAA CTCCACTCAA TATTCGTGGC CTGCGAGATA CTTTCATTCG GGCTCCCTTA TGGGCCATGG ATAGCCGTCC CGCTTCTTTA GATTCACCCG ATACAAAGCG GCAATCATCC GGTCAAATGC CTCGGCCTCC TAAAAGCAGC TCCCAGCAGG GGGATACTCA ATGA
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Protein sequence | MSGFLFKKLH FKRMSKDIHK KAAGHFNSAV SLSKNLEENL KILREALGSS NDVIIREIKI SPHSNVDAAV IYIDGLVDRN LLNHDILQPL MFNLQMIKDN ASHNHTSLID YIKSSVLNVG QITVVQDIDR VIAQVLTGHI AILAEGVSRA LLIDAKGWET RRIEEPKNEL SVRGSKESFT ETLRTNTALL RRKIRDPHLT FQSLQIGERS KTDLSIVYIK GITPENLIEE INQRLQRIDT DTILDVSYIE QFIEDSPNSL FPTVGSSERP DVVVARILEG RAAILLDGSP MALVVPFLFI EGFQNPDDYY ARPFFATLVR WIRLLGYLLS IYLPGIFVSL KTFHPELFPT QLLISVAAAR EGLPLPVVLE ALLMLLLFEI LREAGLRMPR SLGQAVSIVG ALVIGQAAVS AGLVGAPMVI VIATTAIASF LVIPYADSGT LYRFIMTVAG GLLGLFGIVL VSLEMLSHLA SLRSLGVAYL SPVTPLNIRG LRDTFIRAPL WAMDSRPASL DSPDTKRQSS GQMPRPPKSS SQQGDTQ
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