| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_1160 |
|---|
| Symbol | |
|---|
| ID | 4283517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 1342892 |
|---|
| End bp | 1343728 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638138033 |
|---|
| Product | phosphorylase family 2 protein |
|---|
| Protein accession | YP_753840 |
|---|
| Protein GI | 114566686 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0005] Purine nucleoside phosphorylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00784957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAGTTC CTGGCTGTCA GCTGGCCTTT ATCGGCGGGT CCAGCAGCTT GAGTATTGAG
GTTCCAGAAA GCCTGGGCCT GGATTATGTT CAAGTTCTAG AGAAAGGCCT GATTTTTTCC
ACTCCTTACG GATTGAGCCC TGAATTCAAG CTGATAAATA TCCAAGGAGA ACAAGACGAG
AGGAAAGTCT TAAGCTGCCG GATGCATGGT TGGCGCAGCG GGGTTAGCAG GGCGGATGCT
TCCCGTCAAG TCTTTTGGGT TTTACAGCAA GCGGGGGTAA AAAGAGTACT GGCTGAAGGT
GGAGTAGGGG CAATTAATCA CCTGCTCAAA CCCCGAGATG TAATTATACC CCATGATTAC
ATGGACTTTT CCCTGCGCAA AGATGTAGGA CTGGAGGAAC GCTACCTTTT AGTAATGCGT
GAGGCTCTTT GTGGAGTTAT GAGGAAACAC CTGCTAGAAT TACTGGAGAA GAGTTGGAGA
TTTCGAGTTT TTGACCGGGG AGTTTATGTT AATACCGATG GCCGGCATTT TGAGAGCCCT
GCGGAAGTGG CATTATTCAA AATGGCCGGA GGTGACATAG TAGGACAGAG CATTTGTCCC
GAGGTATACC TGGCCCGGGA AATAGGGGCC TGTTTTGCGG GCTTGTACCT GGTGGTTAAC
TATGCCGAAG GAATTGTTAG CCCTTGGGAA CATGAGGAAC TGTCCGAAAT ATTTTATGGC
GAAAGCCTGA CCCTGGCGAG AACGGTCTTT GAATTCTTCA GAACCCTGCC CCCTGGTCGA
GAATGCAATT GTGCTGAACT GCGCAAGGAG ACTCTCTTAA AAGAAGTGTA TAAGTAA
|
|---|
| Protein sequence | MQVPGCQLAF IGGSSSLSIE VPESLGLDYV QVLEKGLIFS TPYGLSPEFK LINIQGEQDE
RKVLSCRMHG WRSGVSRADA SRQVFWVLQQ AGVKRVLAEG GVGAINHLLK PRDVIIPHDY
MDFSLRKDVG LEERYLLVMR EALCGVMRKH LLELLEKSWR FRVFDRGVYV NTDGRHFESP
AEVALFKMAG GDIVGQSICP EVYLAREIGA CFAGLYLVVN YAEGIVSPWE HEELSEIFYG
ESLTLARTVF EFFRTLPPGR ECNCAELRKE TLLKEVYK
|
|---|
| |