Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1096 |
Symbol | |
ID | 4282421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | - |
Start bp | 1261904 |
End bp | 1263505 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638137966 |
Product | hypothetical protein |
Protein accession | YP_753777 |
Protein GI | 114566623 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4124] Beta-mannanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAA AACACTGTTT CATAGCTTTA TTTATTTTAG CCATCTTTCT CCCGCCAGTC TTTTACCCCC TGGATGCGTG TGCTGCAACA ACTTTTATCA AGAATGGAGC CATCAATTAT CAAGCAGAAT TTAATTCTTA TGATGATATT AAGGCTATAG CCACCCTCAA ACCGGGGATT AACCGGCTTC TTGACTATAG CCAGGCCTAC AGCATCGACT ACCCCAGCCA TATGAATATT GATGCTTCCT TATCCCAGGT TAAAACTAGC CTGTGGGACG ATAAAACCTG TATAGAAATC TACCGGGACG ATTTTTCGCA AACGGTACAT ACTGCCGCCG CTTACCAGTA TTACAGCAAC CAGTTTCTTA ACAACCGTAA AGATCATCAA ATCCAGGAGA ACCGCAGTAT CACCATCGCC GGTGTCAAAG CACATCTCTT AAGATGGCAA AGAAGCAAGC TATCACGAGT AGCAGGAGAT AAAAACTACT ATATGAGCGT GGAAATCCCC CGTAATTCTA AAGAAGTTTA CACTATACTG ATAAAATCGA GCTCTCCGGT AGAAAGCTTT CTACCGCTGG TAAAATCATT TACCTTTATT GATAATAATG GTTACAGCAA GATTAATACC CGTTTCAAGA AAAAGGATAA AGCGTGGAAT GAGGAGACAA AAGCTTTTTA TGAGCAATAT TTTGGCCCTG ATGCCAGCTT GCAGTGGGGT ATATTTGAAA ATTCAGCCCC GGCTAACATG GATTATCTCA ACAAACTGGA GGAGAATCTG AACTACAAGT TTAATTTTCT GGTGCTTTAC AAAACCTTTG ATACCCCCTT CCCCCTGGAA GAACTGCAAA AGGCCTATGA TGAACAGAAG TATGTTGAAT TAACCCTGCA GACCATGTGG TATAACCGGG ACAACAGCAG CGTAACTTAT GATATTCTCA ATGGTCATTA CGATTATTTT TTTGAGGACT ATGCTGAAAA AGCCCGCCAA TTCGGGCATC CCATTCTGTT TCGCCTCAAT AACGAAATGA ATGGGGATTG GTGCGTATAC TCCAGTTACT ACAGTTCCAA AGATAGTGAG CTTTTTAAAG AAGTCTGGCG TTATATTTAT AATATATTCC AGCATAAACA GGTCGATAAT GTTATCTGGG TGTGGAATCC CCATGACCTT TCTTTCCCCG GTTTCATGTG GAACCACTAC CTGAACTATT TCCCCGGGGA GGAATATGTG GATATCATAG GGCTTACTGG TTATAATACC GGGACATATC ACAAAGGTGA AATCTGGCGT GGCTTCAGGC AAATATATGA CCCGCTTTAT GAAGAGTACT GCCGTTATTT TGATTATCCC TTCATGATAA GCGAGTTTGC TTGCAGTTCA GTGGGTGGCA ACAAAGCCCT TTGGATTGAG GAAATGTTTG CTCAAATGGA AAAGTACGAC CGGATCAAAG TGGCCATTTG GTTTAACGGG GTGGACTTCG ACCTGGTGGG CCGGGCGGCG CGAAAATATC GTCTGGACGA AAGCCCGGCC ATAATCGAGG CTTTTCAGAA AGGTTTGCCA AGCTATAAAC CTGACCCGAA AGCAAATAAA ACCCAGCAGT AA
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Protein sequence | MRKKHCFIAL FILAIFLPPV FYPLDACAAT TFIKNGAINY QAEFNSYDDI KAIATLKPGI NRLLDYSQAY SIDYPSHMNI DASLSQVKTS LWDDKTCIEI YRDDFSQTVH TAAAYQYYSN QFLNNRKDHQ IQENRSITIA GVKAHLLRWQ RSKLSRVAGD KNYYMSVEIP RNSKEVYTIL IKSSSPVESF LPLVKSFTFI DNNGYSKINT RFKKKDKAWN EETKAFYEQY FGPDASLQWG IFENSAPANM DYLNKLEENL NYKFNFLVLY KTFDTPFPLE ELQKAYDEQK YVELTLQTMW YNRDNSSVTY DILNGHYDYF FEDYAEKARQ FGHPILFRLN NEMNGDWCVY SSYYSSKDSE LFKEVWRYIY NIFQHKQVDN VIWVWNPHDL SFPGFMWNHY LNYFPGEEYV DIIGLTGYNT GTYHKGEIWR GFRQIYDPLY EEYCRYFDYP FMISEFACSS VGGNKALWIE EMFAQMEKYD RIKVAIWFNG VDFDLVGRAA RKYRLDESPA IIEAFQKGLP SYKPDPKANK TQQ
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