Gene Swol_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_1096 
Symbol 
ID4282421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1261904 
End bp1263505 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content43% 
IMG OID638137966 
Producthypothetical protein 
Protein accessionYP_753777 
Protein GI114566623 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4124] Beta-mannanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA AACACTGTTT CATAGCTTTA TTTATTTTAG CCATCTTTCT CCCGCCAGTC 
TTTTACCCCC TGGATGCGTG TGCTGCAACA ACTTTTATCA AGAATGGAGC CATCAATTAT
CAAGCAGAAT TTAATTCTTA TGATGATATT AAGGCTATAG CCACCCTCAA ACCGGGGATT
AACCGGCTTC TTGACTATAG CCAGGCCTAC AGCATCGACT ACCCCAGCCA TATGAATATT
GATGCTTCCT TATCCCAGGT TAAAACTAGC CTGTGGGACG ATAAAACCTG TATAGAAATC
TACCGGGACG ATTTTTCGCA AACGGTACAT ACTGCCGCCG CTTACCAGTA TTACAGCAAC
CAGTTTCTTA ACAACCGTAA AGATCATCAA ATCCAGGAGA ACCGCAGTAT CACCATCGCC
GGTGTCAAAG CACATCTCTT AAGATGGCAA AGAAGCAAGC TATCACGAGT AGCAGGAGAT
AAAAACTACT ATATGAGCGT GGAAATCCCC CGTAATTCTA AAGAAGTTTA CACTATACTG
ATAAAATCGA GCTCTCCGGT AGAAAGCTTT CTACCGCTGG TAAAATCATT TACCTTTATT
GATAATAATG GTTACAGCAA GATTAATACC CGTTTCAAGA AAAAGGATAA AGCGTGGAAT
GAGGAGACAA AAGCTTTTTA TGAGCAATAT TTTGGCCCTG ATGCCAGCTT GCAGTGGGGT
ATATTTGAAA ATTCAGCCCC GGCTAACATG GATTATCTCA ACAAACTGGA GGAGAATCTG
AACTACAAGT TTAATTTTCT GGTGCTTTAC AAAACCTTTG ATACCCCCTT CCCCCTGGAA
GAACTGCAAA AGGCCTATGA TGAACAGAAG TATGTTGAAT TAACCCTGCA GACCATGTGG
TATAACCGGG ACAACAGCAG CGTAACTTAT GATATTCTCA ATGGTCATTA CGATTATTTT
TTTGAGGACT ATGCTGAAAA AGCCCGCCAA TTCGGGCATC CCATTCTGTT TCGCCTCAAT
AACGAAATGA ATGGGGATTG GTGCGTATAC TCCAGTTACT ACAGTTCCAA AGATAGTGAG
CTTTTTAAAG AAGTCTGGCG TTATATTTAT AATATATTCC AGCATAAACA GGTCGATAAT
GTTATCTGGG TGTGGAATCC CCATGACCTT TCTTTCCCCG GTTTCATGTG GAACCACTAC
CTGAACTATT TCCCCGGGGA GGAATATGTG GATATCATAG GGCTTACTGG TTATAATACC
GGGACATATC ACAAAGGTGA AATCTGGCGT GGCTTCAGGC AAATATATGA CCCGCTTTAT
GAAGAGTACT GCCGTTATTT TGATTATCCC TTCATGATAA GCGAGTTTGC TTGCAGTTCA
GTGGGTGGCA ACAAAGCCCT TTGGATTGAG GAAATGTTTG CTCAAATGGA AAAGTACGAC
CGGATCAAAG TGGCCATTTG GTTTAACGGG GTGGACTTCG ACCTGGTGGG CCGGGCGGCG
CGAAAATATC GTCTGGACGA AAGCCCGGCC ATAATCGAGG CTTTTCAGAA AGGTTTGCCA
AGCTATAAAC CTGACCCGAA AGCAAATAAA ACCCAGCAGT AA
 
Protein sequence
MRKKHCFIAL FILAIFLPPV FYPLDACAAT TFIKNGAINY QAEFNSYDDI KAIATLKPGI 
NRLLDYSQAY SIDYPSHMNI DASLSQVKTS LWDDKTCIEI YRDDFSQTVH TAAAYQYYSN
QFLNNRKDHQ IQENRSITIA GVKAHLLRWQ RSKLSRVAGD KNYYMSVEIP RNSKEVYTIL
IKSSSPVESF LPLVKSFTFI DNNGYSKINT RFKKKDKAWN EETKAFYEQY FGPDASLQWG
IFENSAPANM DYLNKLEENL NYKFNFLVLY KTFDTPFPLE ELQKAYDEQK YVELTLQTMW
YNRDNSSVTY DILNGHYDYF FEDYAEKARQ FGHPILFRLN NEMNGDWCVY SSYYSSKDSE
LFKEVWRYIY NIFQHKQVDN VIWVWNPHDL SFPGFMWNHY LNYFPGEEYV DIIGLTGYNT
GTYHKGEIWR GFRQIYDPLY EEYCRYFDYP FMISEFACSS VGGNKALWIE EMFAQMEKYD
RIKVAIWFNG VDFDLVGRAA RKYRLDESPA IIEAFQKGLP SYKPDPKANK TQQ