Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_1089 |
Symbol | thrS |
ID | 4282414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1253943 |
End bp | 1255850 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638137959 |
Product | threonyl-tRNA synthetase |
Protein accession | YP_753770 |
Protein GI | 114566616 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0441] Threonyl-tRNA synthetase |
TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00500732 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCCA TCAGATTGAA AGACGGGAGC CAGCGGGAAT ACCCGGAAGG CATAAGTCTT TTGCAGGTTG CGGAAGATAT CAGCCCTAAA CTGGCCAAAA ATGCAATGGC GGCGGTTTTT AACGGCAAGA TATCTGATTT GAATAGTCAG GTCAAGGAAG ACGGTTGCCT GGAACTGCTT GATTTCGAAG ATGAAAGAGC CCGTGAGGTT TACCGGCATT CTTCCGCTCA TGTCATGGCC CAGGCGGTAA AAAGATTGTG GCCGGAGAGC AAGCTGGCTA TTGGGCCGGC TATTGACAAG GGATTCTATT ATGATTTTGA CAGCGGACAC ACCTTTACTC CAGAGGATTT TGCCGCCATT GAAGAAGAAA TGAAACGGAT TATCAAAGCC GATTATCCCA TAGTTAGAAA AGAACTGTCA CGGGAAGAAG CCCTGCAGTT TTTTAGCGAG CGCAGCGAGG ATTACAAGCT GGAACTGATT GAAGACCTTC CGGAAGATGC TGTAATCAGC ACTTACCAGC AAGGTGAGTT TGTTGACCTC TGTGCTGGTC CGCATCTGCC TTCAACTGGT CGTTTGAAAG CCATAAAGGT CATGAGCCTG GCGGGGGCTT ATTGGCGGGG AAGTGAGAGA AACCCCATGT TACAGAGGGT TTATGCTACT TCCTTTCCTA AAAAGTCTAT GCTCGATGAT TACCTGCAAA AATTGGAGGA AGCGAAAAAA CGCGATCACC GGCGCCTGGG AAGGGAACTG GGCCTGTTTG TGGTTCTGGA CGAAGGTCCA GGCTTTCCCT TTTTCCTGCC CAAAGGGATG GTTTTGCGTA ATGAACTGGA GAATTTTTGG AGAGAGGAAC ACCGAAAAGC CGGTTACCAG GAGATACGCA CCCCGATAAT TCTTAGCCGG GAGCTGTGGG AGAGATCAGG ACACTGGGAT CACTATAAGG ATAATATGTA TTTTACCACC ATTGACGAGG GCGATTACGC CATAAAACCG ATGAATTGCC CGGGAGGCCT GCTGGTATAT AAGCAAAACC TGCACAGCTA CAAGGAACTC CCTTTGCGGA TGGGGGAAAT GGGGCTGGTA CACCGGCATG AAATGTCCGG TGTCTTGCAT GGACTGATGA GGGTGCGGGC CTTCACCCAG GATGATGCCC ATATATTCAT GTTACCGGAA CAGATTATCG ATGAGATCAA GGGTGTAATG GATCTGGTGG ATCGTTTCTA TAGTCTCTTT GGTTTTCCCT ACCATGTAGA GCTTTCCACC AAACCAGAGA AAGCTATGGG CTCTGACGAA ATTTGGGAAG TAGCTACCAA TGCCTTGATT AAAGCCCTGG AGGAAAGGGG TATGGAGTAC AAGGTTAATG AAGGGGATGG AGCTTTTTAC GGACCCAAGA TTGATTTCCA TCTCCAGGAT TCGCTGGATC GCACCTGGCA GTGTGGCACC ATACAACTGG ATTTTCAGAT GCCGGAGAAA TTCGATCTTA CTTATGTGGG TGAGGATGGG GGGAAACACC GCCCGGTAAT GATTCACCGG GTTATATATG GCAGCATTGA ACGCTTCATT GGCATTTTAA CTGAACATTT CGGCGGTGCC TTTCCGTTGT GGCTGGCACC GGTTCAGGTC CGGGTGCTTC CTATTACCCA GAGAAGCCAG GATTATGCTC GCCAGGTAGT TGCGGAACTG GAGCAGGCAG GCATAAGGGT AGAGGCTGAT TTCCGCAGTG AAAAAATTGG CTACAAGATA AGGGAAGGGC AACTGCAGAA GATACCCTAT CTCCTGGTTC TGGGCGACCG GGAGGCGGAA GAGGGCACGG TTTCGGTTCG TCATCGTAAA GAGGGGGATC TGGGTGCCAA ACTTTTGGAG GAATTTAAAC AAACAATTGT GAAAGAAATT AAGGATAAAG TTCTTTAG
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Protein sequence | MISIRLKDGS QREYPEGISL LQVAEDISPK LAKNAMAAVF NGKISDLNSQ VKEDGCLELL DFEDERAREV YRHSSAHVMA QAVKRLWPES KLAIGPAIDK GFYYDFDSGH TFTPEDFAAI EEEMKRIIKA DYPIVRKELS REEALQFFSE RSEDYKLELI EDLPEDAVIS TYQQGEFVDL CAGPHLPSTG RLKAIKVMSL AGAYWRGSER NPMLQRVYAT SFPKKSMLDD YLQKLEEAKK RDHRRLGREL GLFVVLDEGP GFPFFLPKGM VLRNELENFW REEHRKAGYQ EIRTPIILSR ELWERSGHWD HYKDNMYFTT IDEGDYAIKP MNCPGGLLVY KQNLHSYKEL PLRMGEMGLV HRHEMSGVLH GLMRVRAFTQ DDAHIFMLPE QIIDEIKGVM DLVDRFYSLF GFPYHVELST KPEKAMGSDE IWEVATNALI KALEERGMEY KVNEGDGAFY GPKIDFHLQD SLDRTWQCGT IQLDFQMPEK FDLTYVGEDG GKHRPVMIHR VIYGSIERFI GILTEHFGGA FPLWLAPVQV RVLPITQRSQ DYARQVVAEL EQAGIRVEAD FRSEKIGYKI REGQLQKIPY LLVLGDREAE EGTVSVRHRK EGDLGAKLLE EFKQTIVKEI KDKVL
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