Gene Swol_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0976 
Symbol 
ID4282140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp1108782 
End bp1110128 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content49% 
IMG OID638137850 
Producthypothetical protein 
Protein accessionYP_753662 
Protein GI114566508 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGA CCGGAATTCT ATTTTTCCCT GCCTTTGACT GGGCCATATC ACCTACCCAT 
CCGGAAAGAG AGGAGAGGCT TCTCTACACC CGCGATCAGA TCTTTGAAGA GGGGATAATG
GACCTGCCCC AGATTAAGGA ATATCACCCG CGCCTGGCCG AAATCCGTGA TGTAGCCCGA
CTGCATTTCT GTATTCCTAC GGTGGAGGCG CAGATTATCG AAGCCCACCT GGTATCGGCT
GGCTCAGCCC TGGTAATGGC CGATGCTTTC ATGCAAGGAG AAGTAAAAAA TGCCTTTGCC
ATAATTCGCC CGCCGGGGCA TCATGCTATG ACCGTAAGCC ACGGCAACCG GGGGTTCTGT
AATATCAATA ATGAAGCCAT AATGATTGAA TACCTGCGGC AGAAGTATGG GATAAAACGG
GTGGCCATCG TAGATACTGA TGTTCATCAC GGCGATGGAA CCCAGGAAAT TTATTGGCAT
GACCCGGATG TGCTCTTCAT TTCTTTTCAC CAGGACGGAC GCACCCTCTA TCCGGGCTCT
GGCTTCATGG AAGAACTGGG AGGACCCTTG GCCTACGGAA CCACCATAAA TCTCCCCTTG
GCCCCGAAAA CTACTGATGA TGGAATCCTC TATGCTATTG ATGAGCTTAT CCTGCCCATG
CTGGAGGACT TCAAACCGGA TATAGTAATA AACTCGGCCG GTCAGGATAA TCATTACAGC
GATCCCCTGG CCAATATGGC TTTTTCGGCC CGGGGCTACG CCGAATTGAA TACACGGCTG
GCACCGGATA TTGCGGTGCT GGAGGGCGGT TATTCCGTGG AAACGGCCCT GCCCTATGTC
AATATGGGTC TGATAATGGC CATGGCCGGA ATTGACTATT CCAACCTGCG GGAACCGGAT
TACAACCCGA CTCGTTTTAA GGAATCCCCC CGTAATATGG AATATATTAA GAAAATGGTA
GCCCAGCAAT GGACTGCCTA TAAAAACCGC GAAGATACTA TAGCCGATAA CCGCAAGAAA
TCGGGCAATT TCGTTAATTA CAATAAAAGC ATCTTTTATG ATACCGAATA TATTTATGAG
GATCAGATTA ACCATTTGCG TATTTGCCAG AATTGCGGCG GTTTTCGCAT GATTGAGTCC
CGGGCCCATC AGCGGACGGG CGAGCATTTT CATGTGTTCT GCATAAGCAT TCCCGCCAAT
GCCTGCCAGC AGTGTCAGGA GGAAGGCCGC GCCGCTTACC AGGATATGAT CAAGAAGCGT
CCCTTTGACC TGCTATACCT GCAGGATCGG GTAAAAGATG ATTTAAGGAT TTACAAAGTG
CATAAGGATA CAGAAACGGT TTTGTAA
 
Protein sequence
MKPTGILFFP AFDWAISPTH PEREERLLYT RDQIFEEGIM DLPQIKEYHP RLAEIRDVAR 
LHFCIPTVEA QIIEAHLVSA GSALVMADAF MQGEVKNAFA IIRPPGHHAM TVSHGNRGFC
NINNEAIMIE YLRQKYGIKR VAIVDTDVHH GDGTQEIYWH DPDVLFISFH QDGRTLYPGS
GFMEELGGPL AYGTTINLPL APKTTDDGIL YAIDELILPM LEDFKPDIVI NSAGQDNHYS
DPLANMAFSA RGYAELNTRL APDIAVLEGG YSVETALPYV NMGLIMAMAG IDYSNLREPD
YNPTRFKESP RNMEYIKKMV AQQWTAYKNR EDTIADNRKK SGNFVNYNKS IFYDTEYIYE
DQINHLRICQ NCGGFRMIES RAHQRTGEHF HVFCISIPAN ACQQCQEEGR AAYQDMIKKR
PFDLLYLQDR VKDDLRIYKV HKDTETVL