| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0957 |
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| Symbol | |
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| ID | 4282209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008346 |
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| Strand | + |
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| Start bp | 1083049 |
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| End bp | 1084980 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638137831 |
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| Product | collagenase-like protease |
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| Protein accession | YP_753643 |
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| Protein GI | 114566489 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0908875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGGCA ATTATGTAGA ACTGCTGGCT CCGGCGGGCA GGTGGGATGT TCTGGAGCAG
GTAGCTGCAG CAGGTGCAGA TGCGGTTTAC CTGGGGGGCA AACGCTTCAA TATGCGTATG
TTGAGGCAAG ACTATAATTT TTCCGATCAG GAACTGCGGG ATGCAGTCGA TTTTTTACAT
CAGCAAGAGA AAAAAATCTA TATAACCTTA AACAATCTTT ATTATGATGC AGAACTAAAC
GAACTCAAGG ATTATTTATT CTTCCTGCAG GATATCGCAG TTGACGCCTT AATAATACAG
GACATGGCCG TGTTAGATCT GTACCGGGAA CTGCAGCTGA ACTTGCCCTT ACATGCCAGT
GTACAGATGG GTATAGCCAA TCTGCAAGCG GCTCGTTTTT TGGAGGAGCA GGGTTTTAGC
CGGGCTATAT TATCCAAGAA TCTTTCTTTG GAGGAAATCC AAGAAATTCA TACCGGCTCG
AAACTGGCCC TGGAATTCTT CGCTTTTGGC GACCTTTGTA TCGCCCATGC CGGGCAGTGT
TATATGAGCA GCCTGGTAGC TGGTGAAAGC GGTAATCGAG GGCGCTGTTT GAAGCCCTGT
CGCTGGCCCT ACCGCCTGGA GGGGGCGGGG AAGAGCGAGA TTACGGCCTA TTACCTGGCC
CACAATGATC TATGTCTTTA TCCGCAGCTC TCAGCTTTAC TGGCAGCCGG GGTTACTTCC
CTGAAAATAG AAGGCCGCAT GCGCAGTGGA GAATACCTGG CTCATATTAT TGGGATATAT
CGCCAGGCCC TCGACAAGAT AATGGAAGAC CCTGAAGCTT ATAAGATTAA TGAAGAGGAC
TACCAGAAGC TAACGGAAAC ACGAGTACGG GACTTCTGCA GCGGCAATCT TTTTAGCCGG
CCGGGAATTG AATCCATTGG ACTGAGTGGA GAAAGGGAAC CCCTCTTTCC TACCCGGGCC
GTGAAATTGA AAAAACTGGC CACCAATGAA CCCCCCGAAG TCACGGAAGG TCCGGGAATT
GCCTTGCTGG AGCAGCAGCC TTGCTGGAGG GTTAAAATTG GCGATTTTAA GAGTCTGGAA
GCAATGGCGG CTCTGGGAGT AAAACGACTT ATACTGGAAT ATGCAGCCGA TAATCGCTGC
CCCTCAGGCT GGAGACCGGA GGAGATAAAG GCGGCTTTGT CCATGGTGGT TGGCAGTGAT
ATAGAAATAT GGGTGGAGAC ACCCCGGATA GTTAGCCAAA GTGAATTAGG GATGATGGAA
GAGGACTTGC GGACCATAAG CCAGCTTTCC GGTCTGAGTG GCTTTATTGT GAACGAGCCG
GGAAGCTTTC GTCTACTCCA GAGCCTGGGA CAGGCTATCT GGGGTGGTCA TGGTCTAAAC
ACAAGTAATT ACCGGGCAGC GCGTTTCTGG CGGAAACAGG GTATGAGCGG CGTCACTGCC
TCCCTGGAAT TGGAGTGGAG CAGGGTCAAA TCTTTACTTA GCCAGGTAGA GGAAACGGAA
CTGCTGGTTC ATGGTCCTCT TGCCGGAATA ATTACTGATT TGTGCCTCCC CCGGGCGGTA
CAGCCAGCTG CTGCCAATGA TGTCGGTGAA GACTGTCCGC TTCACTGCTT GCAGGAGGAT
TATTATTTAC AGGATGAGTG GGGGCAAAAA TATCGGGTAC GGGCTGATGG CAGTTGCCGA
AACCAGATAT TTTATCCCTA TGACCTGGCT CTTATTCAGC GGCTTCCGGA ACTGCTTATA
GCCGGACTTA AATATTTGCG GATTGACGGA CAATATTATC CGGCTGAATT GCTGAAGCAA
ACAGTTGGGC TTTATATGGA AACAGCGCAG GACTTGCAGG CAGGGAAATG GAATCCTGAA
CGAGTCGGCA GCTTACTCAA ACTCTTTCCT GCCGGGCTTG GCAGCTCGCC TTTGTTTGCT
GAAAAGGATT AA
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| Protein sequence | MPGNYVELLA PAGRWDVLEQ VAAAGADAVY LGGKRFNMRM LRQDYNFSDQ ELRDAVDFLH
QQEKKIYITL NNLYYDAELN ELKDYLFFLQ DIAVDALIIQ DMAVLDLYRE LQLNLPLHAS
VQMGIANLQA ARFLEEQGFS RAILSKNLSL EEIQEIHTGS KLALEFFAFG DLCIAHAGQC
YMSSLVAGES GNRGRCLKPC RWPYRLEGAG KSEITAYYLA HNDLCLYPQL SALLAAGVTS
LKIEGRMRSG EYLAHIIGIY RQALDKIMED PEAYKINEED YQKLTETRVR DFCSGNLFSR
PGIESIGLSG EREPLFPTRA VKLKKLATNE PPEVTEGPGI ALLEQQPCWR VKIGDFKSLE
AMAALGVKRL ILEYAADNRC PSGWRPEEIK AALSMVVGSD IEIWVETPRI VSQSELGMME
EDLRTISQLS GLSGFIVNEP GSFRLLQSLG QAIWGGHGLN TSNYRAARFW RKQGMSGVTA
SLELEWSRVK SLLSQVEETE LLVHGPLAGI ITDLCLPRAV QPAAANDVGE DCPLHCLQED
YYLQDEWGQK YRVRADGSCR NQIFYPYDLA LIQRLPELLI AGLKYLRIDG QYYPAELLKQ
TVGLYMETAQ DLQAGKWNPE RVGSLLKLFP AGLGSSPLFA EKD
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