Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swol_0887 |
Symbol | |
ID | 4282018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
Kingdom | Bacteria |
Replicon accession | NC_008346 |
Strand | + |
Start bp | 1003692 |
End bp | 1004477 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638137755 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_753576 |
Protein GI | 114566422 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000174513 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA CCAGGCTGAT AACTTCACTT GTCGGGATTC CCTTGTTAAT TGCCATCTTA TATCAGGGTG GATGGTACTG GAAAGGATTC TTTATATTGC TGGCCATTGT GGGACTATTT GAGTTCTATC GTATGATTAT AAACAAGGGA CATAAGGTTC TCCAGCTACC CGGTTATTTC TTGCTTTTGA TTATACTATT AGGAGTTGAT TATCCCCAAT TCTTACTTCC AGGTATTTAC CTCTTTTTGG TGGTGGCATT ATTGTACTTT GTACTATGCT ATCCACGTTT TTCACCGCTG GATCTGGCCT GGACTTTATT GGGTTCTGCT TATATCGGTT TTTTGCTGGC TTACACTATC CAGATCGCTG ATCTGTCTCA GCCTTTTTTG GTAATACTCC TGGCCTTTCT TCTAACCTGG GCCAGTGACA TAGGTGGTTA TCTTTTTGGG TCTGTTTGGG GCAAACATAA AATGTCTCCC CTGCTTAGCC CCGGGAAGAG CTGGGAAGGA GCAGCAGGCT CCTTATTATT ATCGCTGTTA GTTTCCTTTG CGTTTTTTAA ACTATTAGAC CTGGGGCAGC TGGGAATTAG CCCGGTAATT TTACTGGGGG TAGCAGCAAG TATTTTGGCT CAGTGCGGGG ATTTGTTTAT TTCCGGTATC AAAAGATATT CTGCAGTCAA GGATACCGGA AGGATTATTC CAGGCCACGG GGGTGTCTTG GACCGTTTTG ACGCTTTTCT ACTGGTAGTG CCGGCGGTTT ATTATTTCTT TGTCTACTGT ATATAA
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Protein sequence | MFKTRLITSL VGIPLLIAIL YQGGWYWKGF FILLAIVGLF EFYRMIINKG HKVLQLPGYF LLLIILLGVD YPQFLLPGIY LFLVVALLYF VLCYPRFSPL DLAWTLLGSA YIGFLLAYTI QIADLSQPFL VILLAFLLTW ASDIGGYLFG SVWGKHKMSP LLSPGKSWEG AAGSLLLSLL VSFAFFKLLD LGQLGISPVI LLGVAASILA QCGDLFISGI KRYSAVKDTG RIIPGHGGVL DRFDAFLLVV PAVYYFFVYC I
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