| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swol_0858 |
|---|
| Symbol | |
|---|
| ID | 4281971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophomonas wolfei subsp. wolfei str. Goettingen |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008346 |
|---|
| Strand | + |
|---|
| Start bp | 978141 |
|---|
| End bp | 979568 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638137726 |
|---|
| Product | flagellar hook protein |
|---|
| Protein accession | YP_753547 |
|---|
| Protein GI | 114566393 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1749] Flagellar hook protein FlgE |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGTT CCATGTATTC TGGGGTTTCG GGATTAAGAA ACCATCAAAC CAGAATGGAT
GTAATCGGCA ATAATATTGC CAATATAAAT ACAGCTGGCT ACAAAAAGAG CCGGGTGGTT
TTTCAGGATA CCCTCTACCA GACGATGAGA GGTGCTACTC GCCCTGATAG TTCCGGTAGT
CGAGGAGGTA CCAATCCTAT GGGTATTGGC CTGGGGATGT CGGTAAGCAG TATTGACCAG
ATTCATACCG GGGCACCAAC CACAGCTACC AATAAACTTT TGGATATGGG AATCGATGGC
GACGGTTATT TTATGATTCG CCATGGTCAA CAGAAATATT TCACCCGAGC AGGAAATTTT
GAACTTGATA CCAAGGGCAA TCTGGTCCAC ACTGCCAATG GATACTATGT GCAGGGCTGG
GTTACCAAAA TCGACCCTGT AACGGGGCAA TGGAATCTGG ATTGTTCCCG AGAAGTAGAG
ACAGTCGACA TAAGTGGTTT ACTGGCCTGT GATCCTCAAG CTACCAAAGA AATGAGCTTT
AGTGGTAATT TAGATGCGGA AATTCCCTTT AAGCAAGTAG ACCCGGAAGA TGAGAGCATT
TACCCGGGCA CCCAGGAGTC GATTATTACC TCCATGGATG TCTGGGATTC GCTGGGGAAA
AAGGAAACGG TTTATTTCCG CTTTTTTAAG TACGAGGTTG ATGCAGGCCC CCCCAGACTT
TCCAACTGGG CTGTTGACAT ATCGCTAAAT AATCCTTTGT TTGAAAATGC TAAAGACTAC
GATTCTACAT CAGATTTCGC TACTGTAGAC TTATCTGTAG ATCCACCAAC AGAAGAAACC
TTGACCACTG GCGAAACGGA GATTGTCCGC TTGTTCAATC TACAATTTGA TGATAACGGG
AAGGTGGTTT TAGCGGGGAC TCCTGATGAT CCCGAACCCA AAACCGTTGA TTTAATAATT
GATCGTGCTT CCGAGGCAGC TGAGGATATT GAGTTTAAAA TCGATTTTTC TGCCATGACC
CAATTCGCGG GCAATTCGGT TACCGAGATC GCTCAGAATG GTTACGGTAT GGGTAGCCTG
AGCAGTTATA CCGTAGGTAT TGACGGTGTC ATCAGAGGTT CCTATGATAA TGGTGAAACC
AGAGATCTGG CCCGGGTGGC TCTGGCTCGT TTCCAGAACC CCGCGGGTTT AACGCAATTA
GGAGGAACCA TGTTTCAGAA ATCAGTTAAC TCGGGAGAAG CAGTGGTTAG TCCCCCCACC
GAGTCGGGTA TGGGAAAGAT AGTTCCCAGC AGTCTGGAAA TGTCCAATGT TGACTTATCG
GAAGAGTTTA CCGACATGAT TGTTACCCAG CGGGGCTTCC AGGCTAATTC CCGCATTATT
ACCACCTCCG ACGAGATGAT TCAGGAACTG GTTAATCTCA AACGTTAA
|
|---|
| Protein sequence | MMRSMYSGVS GLRNHQTRMD VIGNNIANIN TAGYKKSRVV FQDTLYQTMR GATRPDSSGS
RGGTNPMGIG LGMSVSSIDQ IHTGAPTTAT NKLLDMGIDG DGYFMIRHGQ QKYFTRAGNF
ELDTKGNLVH TANGYYVQGW VTKIDPVTGQ WNLDCSREVE TVDISGLLAC DPQATKEMSF
SGNLDAEIPF KQVDPEDESI YPGTQESIIT SMDVWDSLGK KETVYFRFFK YEVDAGPPRL
SNWAVDISLN NPLFENAKDY DSTSDFATVD LSVDPPTEET LTTGETEIVR LFNLQFDDNG
KVVLAGTPDD PEPKTVDLII DRASEAAEDI EFKIDFSAMT QFAGNSVTEI AQNGYGMGSL
SSYTVGIDGV IRGSYDNGET RDLARVALAR FQNPAGLTQL GGTMFQKSVN SGEAVVSPPT
ESGMGKIVPS SLEMSNVDLS EEFTDMIVTQ RGFQANSRII TTSDEMIQEL VNLKR
|
|---|
| |