Gene Swol_0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwol_0614 
Symbol 
ID4281168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophomonas wolfei subsp. wolfei str. Goettingen 
KingdomBacteria 
Replicon accessionNC_008346 
Strand
Start bp707011 
End bp707457 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content43% 
IMG OID638137493 
Productanti-sigma F factor 
Protein accessionYP_753314 
Protein GI114566160 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID[TIGR01925] anti-sigma F factor 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTAA AGAATTATGT ACGCTTCGAA TTTAAAAGCC TGGCGGAGAA TGTATCCTTT 
GCCCGTTCCT GCGTGGCAGC TTTTGCCACA CAATTAGACT TAACCTTGGA AGATATAGAA
GAAATTAAGG TGGTAGTCTC GGAAGCGGTA TCCAATTGCA TAATTCATGC TTATGAAAAC
AGGTGTAATG AGAAGATAGT CGTTTTAGTC AGCATAATGG ATGATCGTAG CCTGGAAATT
GTGGTTGAGG ATCAGGGAAA AGGAATCGAA GATATCGAGA AGGCTATAGA ACCCGCCTTT
TCCAGCGATA GCTCCCGGAC GGGACTGGGC TTTACCTTTA TGAAGTCTTA TATGGACGAA
ATGGAAGTCT TCAGCCAACC CGGCGAAGGA ACTACGGTCC GGCTAAAAAG GCATTTTAGG
AAAAAAGAAC AGGAAGCCTA TGCGTAA
 
Protein sequence
MNVKNYVRFE FKSLAENVSF ARSCVAAFAT QLDLTLEDIE EIKVVVSEAV SNCIIHAYEN 
RCNEKIVVLV SIMDDRSLEI VVEDQGKGIE DIEKAIEPAF SSDSSRTGLG FTFMKSYMDE
MEVFSQPGEG TTVRLKRHFR KKEQEAYA