Gene Swit_5355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_5355 
Symbol 
ID5195842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009507 
Strand
Start bp265012 
End bp265587 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content67% 
IMG OID640579282 
ProductCheB methylesterase 
Protein accessionYP_001260230 
Protein GI148550791 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.85514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGG ATCCGATCAG GGCGGTCGTC ATCGGCGCCT CGGCCGGCGC GGTGCAGGTC 
CTGCTGGAAA TCCTGCCCGC GCTCCCGCCA ACGTTCCCCG TCCCGATCTT CATCGTCGTG
CATATCCCGC CAGATCGCAC CAACGCCCTC ACCACCCTTT TCGCGGATCG CTGCGGGCTG
ACAGTCAAGG AGGCGGAAGA CAAGGAGACT CCTGTCCCGG GCACGGTCTA TTTCGCGCCG
GCCGATTATC ATCTGCTGAT CGAACAGGAC GGGCGCGTGG CCCTGGCGAT GGACGAGCCG
GTTCATCATT CGCGGCCAGC GATCGACGTC CTTTTCGAGA CCGCGGCCGA CGCGTTCGGA
CCCGATCTCG TCGCCATCGT GCTGACCGGT GCGAACGAGG ATGGTGCCGC GGGCCTGCGA
GCCGTCGGGG AGGCGGGCGG GCTGACCCTT GTCGAAGACC CGACGAGTGC CTCGAGTTCT
ACCATGCCGA CCGCCGCGCT TGCGGCGTGG CCCCAAGCGC GGGCTCAGGA TGTGCCCGGC
ATCATCGCTT ACCTTCAGAC CCTGGTGGCT CCATGA
 
Protein sequence
MSRDPIRAVV IGASAGAVQV LLEILPALPP TFPVPIFIVV HIPPDRTNAL TTLFADRCGL 
TVKEAEDKET PVPGTVYFAP ADYHLLIEQD GRVALAMDEP VHHSRPAIDV LFETAADAFG
PDLVAIVLTG ANEDGAAGLR AVGEAGGLTL VEDPTSASSS TMPTAALAAW PQARAQDVPG
IIAYLQTLVA P