Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_5286 |
Symbol | |
ID | 5195830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009507 |
Strand | - |
Start bp | 185894 |
End bp | 186982 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640579213 |
Product | alpha/beta hydrolase domain-containing protein |
Protein accession | YP_001260161 |
Protein GI | 148550722 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.365819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.925115 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAG CGCCTTTGCT CGCCGCCGGC ACGCTTGTCT CCGCGGCTCT TGCCTTCGCC GCGCTCGGGC CCGTAGCGGC GCCGGTTTTG GCGGCGGCGG CGCAGGGCCA GCCGGGCATC CCGGCGAGCG GCGCCAAGGT CGACGCCGAC AACCAGGCCG TTCTCGATGC CTTGAAAGGG CTTGGCCTGC GGCCCTACCA CACGCTCAGT CCGGCCGAAG CGCGCCTGCA ACCGAGCTTC GCCGACGGGG TAAAGGCCGT GCTCCAGAAG CAGGGTCGCC CGGTTGCGCC TCCACCCGGC GTCGCGACGC AGGATATCCA GGTAGCCGGC GGGGCGGGTC CGATCCCAGC ACGGGTCTAT CGACCGGCCG ACGCACAAGG TCCCCTTCCC GTCATCGTCT ACTACCATGG CGGCGGATGG GTGCTCGCGA CCATCGACAC CTATGATGCC TCGGCCCGTG CCCTCGCCCG AGAAGCGCGC GCGATCGTGA TCTCGGTCGA ATATCGCAAG GCGCCCGAGG CGAAATTCCC GGCTCAGCAC GACGACGCCC TCGCGGCATA CCGCTGGGCG CTCGGCCATG CCGGCGAGAT CGGTGGTGAC CCGCGCAAGA TCGCGCTCGC GGGCGAAAGC GCCGGCGGCA ACCTCGCCCT CGCGACCGCG ATCGCCGCGC GCGATGCCAA GTTGCAAAAG CCCGCGCATG TATTGACCAT CTATCCGATC GCCGGTTCCG ACCTCAACAC CCCCTCCTAT CAGGAAAACG CGAATGCCAT GCCGCTCAAT CGGGCGGCCA TGGCCTGGTT CCTCCATCAC ACGACGCGCG GCCCGGCTGA CGCAACCGAT CCGCGCATCA ATCTCGTCGC GGCAAACCTG CGCGGTCTCC CGCCCGTGAC CCTCATCCAG GCCCAGATCG ATCCGTTGAC GTCCGAGGGC CAGACGCTTG CAGGCCGGCT GCGCGCCGCG GGTGTGCCGG TTGCAACGCA GCTCTATCCT GGCGTTACGC ATGAGTTCTT CGGCGCCGAT GCGGTGATCC GTAAAGCTGG AGAAGCCCAG CGCTTCGCCG GCACACGGCT GAAGGCGAGC TTTCGTTGA
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Protein sequence | MRKAPLLAAG TLVSAALAFA ALGPVAAPVL AAAAQGQPGI PASGAKVDAD NQAVLDALKG LGLRPYHTLS PAEARLQPSF ADGVKAVLQK QGRPVAPPPG VATQDIQVAG GAGPIPARVY RPADAQGPLP VIVYYHGGGW VLATIDTYDA SARALAREAR AIVISVEYRK APEAKFPAQH DDALAAYRWA LGHAGEIGGD PRKIALAGES AGGNLALATA IAARDAKLQK PAHVLTIYPI AGSDLNTPSY QENANAMPLN RAAMAWFLHH TTRGPADATD PRINLVAANL RGLPPVTLIQ AQIDPLTSEG QTLAGRLRAA GVPVATQLYP GVTHEFFGAD AVIRKAGEAQ RFAGTRLKAS FR
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